Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit (RefSeq) from Shewanella amazonensis SB2B

Subject, 613 a.a., succinate dehydrogenase flavoprotein subunit from Agrobacterium fabrum C58

 Score =  569 bits (1466), Expect = e-166
 Identities = 296/557 (53%), Positives = 373/557 (66%), Gaps = 7/557 (1%)

Query: 8   FDAVVIGAGGAGMRAALQISKEGKSCALLSKVFPTRSHTVSAQGGITVALGNAHEDNWEY 67
           +D +V+GAGGAG+RA L ++++G   A ++KVFPTRSHTV+AQGGI  +L N   D W++
Sbjct: 21  YDVIVVGAGGAGLRATLGMAEQGFRTACITKVFPTRSHTVAAQGGIAASLTNMTPDCWQW 80

Query: 68  HMYDTVKGSDFIGDQDAIEYMCQTGPEAIIELEHMGLPFSRFENGKIYQRPFGGQSKNFG 127
           H+YDTVKGSD++GD DA++Y+    P+A+ ELEH G+PFSR   GKIYQRPFGG  +N+G
Sbjct: 81  HLYDTVKGSDWLGDVDAMQYLAMEAPKAVYELEHYGVPFSRNAEGKIYQRPFGGHMQNYG 140

Query: 128 -GEQAARTAAAADRTGHALLHCLYQQNVKNKTQVFSEWYALDLVKNEDGAIVGCTAIDIE 186
            G    RT AAADRTGHA+LH LY Q+++N  + F E++ALDL+   DG   G  A +++
Sbjct: 141 EGPPVQRTCAAADRTGHAILHTLYGQSLRNNAEFFIEYFALDLIMAPDGRCTGVVAWNLD 200

Query: 187 SGEIVYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMAYRAGVQLQDMEMWQFHPTGI 246
            G I  F AK  VLATGG GR Y S T+AH  TGDG GM  RAG+ LQDME  QFHPTGI
Sbjct: 201 DGTIHRFSAKMVVLATGGYGRAYFSATSAHTCTGDGGGMIARAGLPLQDMEFVQFHPTGI 260

Query: 247 AGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLASRDVVARSMMTEIREGRGCDGP 306
            GAG L+TEG RGEGGYL+N +GERFMERYAP+AKDLASRDVV+R M  EIREGRG  G 
Sbjct: 261 YGAGCLITEGARGEGGYLVNSEGERFMERYAPSAKDLASRDVVSRCMTMEIREGRGV-GK 319

Query: 307 MGPHIKLKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIPVIPTCHYMMGGLPTKVSG 366
              HI L LDHL    L  RLPG+ E ++ FA +D    PIPV+PT HY MGG+PT   G
Sbjct: 320 NKDHIFLHLDHLDPAILHERLPGISESAKIFAGVDVTREPIPVLPTVHYNMGGIPTNYWG 379

Query: 367 QVIRKNDDGSETDIVGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGQHLGKALDET 426
           +V+  + +  E    GL AVGE  C SVHGANRLG NSL+DLVVFGRAA     + +D  
Sbjct: 380 EVLNADANNPERIAPGLMAVGEAGCASVHGANRLGSNSLIDLVVFGRAAAIRAAQVIDRD 439

Query: 427 ADPKAATDADIEQSLARLKRWESNKDGEDPAQIRKDLQMCMQLNFSVFRTGEAMAEGLEQ 486
           A   A   A  ++ + R             A +R  +Q  MQ + +VFRT E++  G ++
Sbjct: 440 APVPALDIAACDKIMERFDSLRYANGSTPTAVLRDKMQRAMQDDAAVFRTQESLESGCQR 499

Query: 487 LQAIRKRLENAKLSDNSKEFNTQRIECLELDNLMATAIATAYAANFRTESRGAHSREDFT 546
           L AI K L + K++D S  +N+  +E LEL NLMA AI T Y A  R ESRG+H+REDF 
Sbjct: 500 LSAIWKELPDVKVTDRSMVWNSDLVETLELHNLMANAITTVYGAEARKESRGSHAREDFV 559

Query: 547 E-----RDDDNWLCHSL 558
           +     RDD NW  H+L
Sbjct: 560 DGPFGGRDDVNWRKHTL 576