Pairwise Alignments

Query, 332 a.a., periplasmic binding protein/LacI transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

Subject, 350 a.a., LacI family DNA-binding transcriptional regulator from Serratia liquefaciens MT49

 Score =  226 bits (577), Expect = 5e-64
 Identities = 124/329 (37%), Positives = 194/329 (58%)

Query: 1   MATIYDVSFLAGVSLATVSRVVNNTGKVSDKTRQKVHDAMAKLDYRPNTIAQSLASNRSN 60
           MAT+ DV+  AGVS ATVSRV+N+T  V   TR++V  AM + +Y  N  A +LA    N
Sbjct: 1   MATMKDVARRAGVSTATVSRVINSTAYVEPVTRERVEKAMREFNYHRNAAALALAKRSGN 60

Query: 61  SIGVLVSQLDGPFYGPMMREVESALRAANKHVIIAAGHSDAAQEKDGVEFLLSRGCDALI 120
            +G+L   LD PF+  + R VE   R     +++ +G   A  EK+G++FL+++GC++++
Sbjct: 61  MLGLLTGNLDDPFFSRLARGVEDITRKDGVKLMVCSGGHQAELEKNGLDFLINQGCESIV 120

Query: 121 VDAEILSNGYLVELCQGKTPVVLINRHVDGIDERCVHLNNLQGGLLASRHVLEKGHKQIA 180
                +S+  ++        +V+INR++  I  RC+ L+N+     A+R ++E+GH+ IA
Sbjct: 121 AHVTRMSDADILRYAAHTPAMVVINRYLPAIANRCIWLDNVSASQAATRMLIERGHRNIA 180

Query: 181 YISGPLFKLDARERLEGHRQALAEQGIAFDENLFYEGDFREEGGYEAMAQLLSRGRDFTA 240
            I+  L   D ++RLEG+R A+AE GIA   +      F E+GG  A  ++L+  + FTA
Sbjct: 181 CITTDLPIDDRKQRLEGYRTAMAEAGIAVPGDWIISVPFNEQGGEAAAEKILASKQAFTA 240

Query: 241 VVCANDQMASGAIAQCLERGLRVPEDISFVGFDNIPFPRYISPKLTTVCNPIQDMGRMAA 300
            +  ND MA+G +    +R + +PEDIS VGFD++   +Y+ P LTTV  PI+ M R AA
Sbjct: 241 ALTFNDVMAAGMMRTFRQRRMNLPEDISIVGFDDVALAKYLHPPLTTVHYPIEKMARRAA 300

Query: 301 HWVLREVYDQTDVTFCHRFEPELVVRDSV 329
           +  L+           +RF  EL++RDSV
Sbjct: 301 NLALQLNSGTAVTPQNNRFSAELILRDSV 329