Pairwise Alignments

Query, 332 a.a., periplasmic binding protein/LacI transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

Subject, 326 a.a., Putative transcriptional regulator from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  223 bits (569), Expect = 4e-63
 Identities = 121/320 (37%), Positives = 186/320 (58%)

Query: 10  LAGVSLATVSRVVNNTGKVSDKTRQKVHDAMAKLDYRPNTIAQSLASNRSNSIGVLVSQL 69
           +AGVS ATVSRV+N T  V   TR++V  AM  L+YR N  A +LA    + +G+L   L
Sbjct: 1   MAGVSTATVSRVINQTAWVEPVTRERVEKAMRDLNYRRNAAAIALAKRSGDMLGLLTGNL 60

Query: 70  DGPFYGPMMREVESALRAANKHVIIAAGHSDAAQEKDGVEFLLSRGCDALIVDAEILSNG 129
             PF+  + R VE   R     +++ +G  D   EK G++FL+++GC+A++V A  L + 
Sbjct: 61  ADPFFARLARGVEDVSRKQQYRLMVCSGGHDEEMEKAGLDFLVNQGCEAIVVHASRLPDK 120

Query: 130 YLVELCQGKTPVVLINRHVDGIDERCVHLNNLQGGLLASRHVLEKGHKQIAYISGPLFKL 189
            L+        +V++NR++ G+  RC+ L N      A+R++L  GH++IA ++  L  +
Sbjct: 121 ELLRYAAHFPALVVVNRYIAGMANRCIWLENRSAAREATRYLLANGHRRIACVTSDLPII 180

Query: 190 DARERLEGHRQALAEQGIAFDENLFYEGDFREEGGYEAMAQLLSRGRDFTAVVCANDQMA 249
           D +ERL+G+R+AL E GI+ D        F EEGG  A  QL++ G   TA V  ND MA
Sbjct: 181 DRQERLDGYREALEEYGISPDPRWVISVPFNEEGGERAAHQLINSGLPLTAAVTFNDVMA 240

Query: 250 SGAIAQCLERGLRVPEDISFVGFDNIPFPRYISPKLTTVCNPIQDMGRMAAHWVLREVYD 309
           +G +    +RG+++P+ +S VGFD++   RY+ P LTT+  P++ M R AA   ++    
Sbjct: 241 AGIMRILHQRGVQLPQQLSIVGFDDVVLARYLYPALTTMHYPVEQMARCAAQLAIQLYQG 300

Query: 310 QTDVTFCHRFEPELVVRDSV 329
            T     + F  ELV+RDSV
Sbjct: 301 ITPPPSSNHFNAELVIRDSV 320