Pairwise Alignments

Query, 213 a.a., outer membrane protein W (RefSeq) from Shewanella amazonensis SB2B

Subject, 212 a.a., outer membrane protein W from Escherichia coli BL21

 Score =  212 bits (540), Expect = 4e-60
 Identities = 108/215 (50%), Positives = 137/215 (63%), Gaps = 5/215 (2%)

Query: 1   MKKSYLSGLIAASLLSVVSASAFAHQAGDIIVRAGAVVVAPNESSP-VVADVAEFGVSNN 59
           MKK  ++ L   +LLS    SAFAH+AG+  +RAG+  V P E +   +  +  F V+NN
Sbjct: 1   MKKLTVAALAVTTLLS---GSAFAHEAGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNN 57

Query: 60  TQLGLNFGYMLTDNWAIELLAATPFTHDVSLGVLGKIAETKHLPPTLVAQYYFGNANSAF 119
           TQLGL F YM TDN  +ELLAATPF H +     G IA   HLPPTL+AQ+YFG+A+S F
Sbjct: 58  TQLGLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPPTLMAQWYFGDASSKF 117

Query: 120 RPYVGVGVNYTNFFDTEFT-NDLDGALTDLSLSTSVGWAAQVGFDYSFNKNWMLNASVWY 178
           RPYVG G+NYT FFD  F  +  +  L+DLSL  S G A QVG DY  N++W++N SVWY
Sbjct: 118 RPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWY 177

Query: 179 ADISTDVKFNLGDTPVVVETDIDPWVYMVSVGYKF 213
            DI T   + LG         +DPWV+M S GY+F
Sbjct: 178 MDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF 212