Pairwise Alignments

Query, 341 a.a., beta-hexosaminidase (RefSeq) from Shewanella amazonensis SB2B

Subject, 338 a.a., glycosyl hydrolase from Agrobacterium fabrum C58

 Score =  140 bits (352), Expect = 6e-38
 Identities = 98/293 (33%), Positives = 142/293 (48%), Gaps = 17/293 (5%)

Query: 4   LMLDIAGTQLKREEEALLASPMTGGLILFSRNFENRAQLNALIASVRRV--RSDLLIAVD 61
           ++L  +G  L  +E AL       G ILF RN   + Q+  L+A++R    R D  + +D
Sbjct: 7   MILGCSGLSLTADEIALYRDEQPWGFILFGRNIGEKQQITDLVAAMRDAVGRPDAPVLID 66

Query: 62  HEGGRVQRFR----EGFTQIPAMGDILPAAGQDLGLAKRWATELGFLMAVELLASDIDLS 117
            EGGRVQR +    + +     +G+I     +  GL   W   +  L A +L    I++ 
Sbjct: 67  QEGGRVQRIKPPILQAYPNARILGEIYER-DRSAGLRAAWL--MSRLHAFDLTKFGINVD 123

Query: 118 FAPVLDV--NGVSDVIGRRAFSANPDEITALADAFIRGMDSAGMRAVGKHFPGHGSVKAD 175
             PVLDV   G S+VIG RA+   P  +  +  A   G+ + GM  + KH PGHG    D
Sbjct: 124 CLPVLDVPVEGASNVIGNRAYGYTPTMVAEMGQAAADGLKAGGMLPIMKHMPGHGRGMVD 183

Query: 176 SHVAMPVDSREAGEILNFDMQPFKQLIDAQRLDGVMPAHVVYDKL-CPNPAGFSSFWLQE 234
           SH  +PV      E+   D  PF+ L         M AH+V++ +    PA  S   + E
Sbjct: 184 SHHELPVVDVPLDELDAHDFVPFRALKHELM---AMSAHLVFNAVDRERPATTSKKVIDE 240

Query: 235 KLRGELGFDGVIFSDDLGMEGAAFAGDYPARARAALAAGCDMILVCNNRDGAL 287
            +RG +GFDG++ SDD  M   A  G    RA   +A GCD++L CN   G +
Sbjct: 241 IIRGRIGFDGLLMSDDSSMN--ALKGTLGERAANIVAGGCDIVLHCNGVMGEM 291