Pairwise Alignments

Query, 437 a.a., symporter for L-glutamate, L-glutamine, and L-aspartate (from data) from Shewanella amazonensis SB2B

Subject, 417 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  300 bits (769), Expect = 4e-86
 Identities = 170/412 (41%), Positives = 246/412 (59%), Gaps = 15/412 (3%)

Query: 7   SKIGLTGKILIGMGAGILIGLLLRNFFGGSEWVQDYITEGFFHVIGTIFINSLKMLVVPL 66
           +KI    K+L G   GIL G+LL    G S  V           +G +FI ++KMLV PL
Sbjct: 7   NKIPFWQKVLAGFALGILTGVLL----GESATV--------LKPLGDLFIAAIKMLVAPL 54

Query: 67  VFISLVCGTCSLSEPSKLGRLGGKTLAFYLFTTAIALVVAISAAVLVQPGNASLASESMQ 126
           V  ++V    SL   S L RL  KTLA ++ T  +A ++ ++       G  S+   S +
Sbjct: 55  VLCAIVVSITSLGSSSNLKRLSFKTLALFMLTGTLASLIGLAVGSSFDMGG-SMQLASTE 113

Query: 127 YSAKEAPSLADVLINIVPSNPMKALSEGNMLQIIIFAVIFGFAISHIGERGRRVAALFDD 186
              +  P  A VL++++P NP  +L+ G +LQII+FA + G AI+ +GE+   +  +FD 
Sbjct: 114 VRERVVPGFAQVLLDMIPVNPFASLTNGKVLQIIVFAALVGIAINAVGEKAEPLKKVFDA 173

Query: 187 LNEVIMRVVTLIMQLAPYGVFALMGKLALTLGMETLESVIKYFMLVLVVLLFHGFVVYPT 246
             EV+ ++  ++++L P GVF LM  +    G+ TL  + K+ + + V  L H   VY  
Sbjct: 174 GAEVMFQLTRMVLKLTPIGVFGLMAWVVGEYGLSTLLPLGKFIIAIYVAALIHIVFVYGG 233

Query: 247 LLKLFSGLSPLMFIRKMRDVQLFAFSTASSNATLPVTMEASEHRLGADNKVASFTLPLGA 306
           L+K  + LSPL F RK    QL AFSTASS  TLPVT + +E  +G   + ++F LP+GA
Sbjct: 234 LVKFAARLSPLQFFRKAMPAQLVAFSTASSFGTLPVTTKCAE-SMGVSKRYSAFVLPMGA 292

Query: 307 TINMDGT-AIMQGVATVFIAQVFGIDLTITDYAMVVMTATLASIGTAGVPGVGLVMLAMV 365
           T+NMDG   I   +A +FIAQ++GI L +TDY ++ +TAT+AS+GTAGVPG  +VML + 
Sbjct: 293 TMNMDGCGGIYPAIAAIFIAQIYGIPLDMTDYMLIAVTATVASVGTAGVPGSAMVMLTVT 352

Query: 366 LNQVGLPVEGIALILGVDRMLDMVRTAVNVTGDTVATVVIAKSEGALNEAVF 417
           L  VGLP+EGIA I  +DR++DM+RT  NVTGD +  VV+  SEG L+   F
Sbjct: 353 LGVVGLPLEGIAFIAAIDRVIDMIRTCTNVTGDMMTAVVVGNSEGELDRERF 404