Pairwise Alignments

Query, 437 a.a., symporter for L-glutamate, L-glutamine, and L-aspartate (from data) from Shewanella amazonensis SB2B

Subject, 414 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  314 bits (804), Expect = 4e-90
 Identities = 167/407 (41%), Positives = 253/407 (62%), Gaps = 15/407 (3%)

Query: 11  LTGKILIGMGAGILIGLLLR------NFFGGSEWVQDYITEGFFHVIGTIFINSLKMLVV 64
           L+ +I +G+  G+L G L++      NFF G+      I  G    +GT+F+N + MLVV
Sbjct: 5   LSARIFLGLAIGLLSGTLVQYVLHDINFFSGT---LVEIASG----LGTMFVNMIMMLVV 57

Query: 65  PLVFISLVCGTCSLSEPSKLGRLGGKTLAFYLFTTAIALVVAISAAVLVQPGNA--SLAS 122
           PLVF+S+VCG C L + S  GRLGGKT  FY+  T +A+  A++ A+L++PG        
Sbjct: 58  PLVFVSIVCGVCELKDLSSFGRLGGKTFGFYIINTLVAIFAALTVALLLEPGKGVDMTGG 117

Query: 123 ESMQYSAKEAPSLADVLINIVPSNPMKALSEGNMLQIIIFAVIFGFAISHIGERGRRVAA 182
             +  +A E PSL  ++++IVP NP+ A   GNMLQ+I  A++ G  I  +GE      +
Sbjct: 118 GELAITATELPSLMALVVDIVPRNPVAAFMSGNMLQVIFMALLLGGVIKSLGEHVTGAVS 177

Query: 183 LFDDLNEVIMRVVTLIMQLAPYGVFALMGKLALTLGMETLESVIKYFMLVLVVLLFHGFV 242
            F   N+++M++++++M LAP GV ALM KL  TL      SV++Y +L+L +LL   FV
Sbjct: 178 AFQTANKIMMKLISVVMHLAPIGVGALMFKLGATLEAGVFLSVMEYLVLILGLLLLWIFV 237

Query: 243 VYPTLLKLFSGLSPLMFIRKMRDVQLFAFSTASSNATLPVTMEASEHRLGADNKVASFTL 302
           VYP  ++LF+ +   +F  K ++  LF+ STASSNAT+PVTM     +L  +  VA F +
Sbjct: 238 VYPYAVQLFTPVKASVFREKTQEQILFSLSTASSNATIPVTMRTLTEKLKVNRAVAGFGV 297

Query: 303 PLGATINMDGTAIMQGVATVFIAQVFGIDLTITDYAMVVMTATLASIGTAGVPGVGLVML 362
           PLGAT+NM G +I   VA  FIA  FG+ +T+     ++ +  L S+G  GVPG G+VM+
Sbjct: 298 PLGATMNMGGVSIYITVAIFFIANAFGMPITMEQLPALIFSIFLLSVGAGGVPGGGMVMI 357

Query: 363 AMVLNQVGLPVEGIALILGVDRMLDMVRTAVNVTGDTVATVVIAKSE 409
            ++++Q+GLPVE  AL+  +DR++DMV T+ NV GDT    ++ ++E
Sbjct: 358 GVLIHQMGLPVEAFALVAALDRLIDMVLTSCNVVGDTAVLTIVDQTE 404