Pairwise Alignments

Query, 569 a.a., signal transduction histidine kinase, LytS (RefSeq) from Shewanella amazonensis SB2B

Subject, 566 a.a., sensor histidine kinase from Dickeya dianthicola 67-19

 Score =  234 bits (597), Expect = 7e-66
 Identities = 159/542 (29%), Positives = 286/542 (52%), Gaps = 28/542 (5%)

Query: 3   LILLLTQQMCLYLVFVYLASKTPLFKVLTENAPRLPHKV-IIYVIFSAFCIMATYFGEQT 61
           ++L +  +  L L+ ++  ++T  F+ L +        + ++  IFS F + +T+ G   
Sbjct: 7   MLLAVYDRAALMLICLFFLTRTRHFRQLLQQDEHSRFDLAVVTAIFSLFALFSTWSGINV 66

Query: 62  HGAIANTRAMGAVLGGLLGGPVTGFFVGLTGGLHRY--SMGGFTDVACALSTTLEGLSAG 119
            G++ N R +  + GG+L GP  G   G+  G HRY   + G T + C +++ +    AG
Sbjct: 67  EGSLVNVRVVAVMSGGILFGPWVGITTGIIAGAHRYLIDIHGITSIPCLITSIV----AG 122

Query: 120 LISLTLRRAGKTELIFHPLVAGFVTFYAEVMQMLIILLVAKPYDEAWALVRQIAPPMLLV 179
            +S  + R    +  +   +AG +    E + ML+++L A+P+     +V  IA PM+L 
Sbjct: 123 FMSAWIHRRIPRDRHWSVGIAGGML--CESLTMLLVVLWARPFSLGLDIVAHIAIPMIL- 179

Query: 180 NSMGSALFMSMLKDQKAMFDKLSSTFSTKALKIAERSVGLLSQGFNEKTSAQVARIVIEE 239
            ++   L + +++  +   + +++  +  AL IA +++ L     N ++ + V  I+  +
Sbjct: 180 GAVSIGLIVLLVRSVEGEKEAIAARQAKLALDIANKTLPLFRHS-NSQSLSTVCDIIRCD 238

Query: 240 TNVGAVAITDREKLLAFIGIGADHHIPGTPIASAITLEAIRDNKVMFADGMEVPYACSIS 299
            +  AVAITD  ++LA++G+G +++  G    S  T  A++D K++  +  E      I 
Sbjct: 239 IDADAVAITDISQVLAYVGVGEENYHSGDRDLSPTTQLALKDGKIIIKNNDEAYRTPEIH 298

Query: 300 SQCRLGSSLVIPLRSDTEVIGTIKLYEPKNKLFLNINRTLGEGIAKLLSNQILYGRVEQQ 359
           S       +VIPL    EV GT+K+Y  +        + +  G+++++S Q+   R EQ 
Sbjct: 299 SM------IVIPLWEKGEVTGTLKIYYRRAHRITWSLKEMAIGLSQIISTQLEVSRAEQL 352

Query: 360 KNLLTQTELKLLQAQVNPHFLFNALNTIGAIIRRDPDMARGLLQKLSQFLRINLKRS-PE 418
           + +  + EL+ LQ+++NPHFLFNALN I   IR +PD AR L+  LS++LR NL+R+  E
Sbjct: 353 REMANRAELRALQSKINPHFLFNALNAISTSIRLNPDTARQLIINLSRYLRYNLERNDEE 412

Query: 419 MVTLADELEHIDAYLGIEKARFIDRLSVNIAIPPELMHQKLPAFTLQPIIENAVKHGTSQ 478
           ++ +  EL  I  Y+ IE+ARF D+L+V   I  E+    +P+  +QP+IENA+ HG   
Sbjct: 413 LIDIKSELYQIKDYIAIEQARFGDKLTVIYDIDEEVSCH-IPSLLIQPLIENAIVHGIRP 471

Query: 479 LLSPGVIDVSGRQQEQMLVLEVADN---------AGLYRPTPNNEGLGMNLVHKRIQNQF 529
               GV+ +S ++Q + + + V D          A + R       +G+  VH RI+  +
Sbjct: 472 CKGKGVVTLSIQEQGERIRVTVRDTGSGISDEVIARVERNELPGNKIGLLNVHHRIKLLY 531

Query: 530 GE 531
           GE
Sbjct: 532 GE 533



 Score = 25.8 bits (55), Expect = 0.005
 Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%)

Query: 210 LKIAERSVGLLSQGFNEKTSAQVARIVIEETNVGAVAITDREKLLAFIGIGADHHIPGTP 269
           +++  R  G    G +++  A+V R  +    +G + +  R KLL   G+      PGT 
Sbjct: 489 IRVTVRDTG---SGISDEVIARVERNELPGNKIGLLNVHHRIKLLYGEGLRIRRLNPGTE 545

Query: 270 IASAITLEAIRDNKVMFA 287
           I   IT + +  +  M A
Sbjct: 546 IDFFITRDNLNRSDSMAA 563