Pairwise Alignments

Query, 381 a.a., exonuclease SbcD, putative (RefSeq) from Shewanella amazonensis SB2B

Subject, 410 a.a., exonuclease subunit SbcD from Serratia liquefaciens MT49

 Score =  136 bits (343), Expect = 9e-37
 Identities = 98/297 (32%), Positives = 138/297 (46%), Gaps = 25/297 (8%)

Query: 1   MRFIHTSDWHLGRTLHNQSLLDEQAQMLETLLTLIETHEVDALVIAGDIFDRSVPPAAAV 60
           MR IHTSDWHLG+    +S   E    L  L+  IE H+VDAL++AGD+FD   PP+ A 
Sbjct: 1   MRLIHTSDWHLGQYFFTKSRAAEHQAFLRWLIEQIEQHQVDALIVAGDLFDTGSPPSYAR 60

Query: 61  SLLDDFLDKVVQQLKVSVIAIGGNHDGQERLAFGARQMAGAGLYIQGPVRASIEPVHI-- 118
            L + F+ + +Q+    ++ +GGNHD    L      ++     +    ++ IE   +  
Sbjct: 61  ELYNRFVVE-LQRTGCQLVVLGGNHDSVATLNESRELLSCLNTTVIANAQSEIEQQVLVL 119

Query: 119 ---DGKQGAAFFYPIPYAEPALVRHLLNDEDIHSHQDAMAALLAKVTAHN---------- 165
              DG+ GA     IP+  P   R LL      S      AL   +  H           
Sbjct: 120 NQRDGQPGAV-LCAIPFLRP---RDLLTSRAGESGVQKQQALQESIADHYHTLYQAACAR 175

Query: 166 ----SDGLPKIVISHCFLDGGNESDSERPLSIGGADKISPALFAPFDYAALGHLHGPQ-Y 220
               S  LP +   H    G   SDS R + IG  D      F P DY ALGH+H  Q  
Sbjct: 176 RDALSLPLPIVATGHLTTVGVTTSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQNV 235

Query: 221 KGAEHVRYSGSPLKYSFSEQHQNKSVTLVNILPGQAPDIRLLPIKPQRDVRIIEGYL 277
             +EH+RYSGSP+  SF E  + KSV +V+   G    +  L I   + +++I+G L
Sbjct: 236 AKSEHIRYSGSPIPLSFDELGKAKSVFMVDFAAGALQQVCALEIPSFQPMQLIKGDL 292