Pairwise Alignments

Query, 506 a.a., proton-dependent oligopeptide transporter (POT) family protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 489 a.a., dipeptide/tripeptide permease DtpB from Escherichia coli ECRC99

 Score =  363 bits (932), Expect = e-105
 Identities = 196/499 (39%), Positives = 298/499 (59%), Gaps = 15/499 (3%)

Query: 2   TTGNTQVSKTRSFMTVSLIELWERFGFYGMQALIVYFMVQRLGFADERANLVWSACAALI 61
           TT    + + R F  +  +ELWERFG+YG+Q ++  F V++LGF+ E+A + + A AAL+
Sbjct: 4   TTPMGMLQQPRPFFMIFFVELWERFGYYGVQGVLAVFFVKQLGFSQEQAFVTFGAFAALV 63

Query: 62  YVAPAIGGWVGDKVLGTKRTMLLGAGILTLGYALMAVPTDNTWFLFSALGVIVVGNGLFK 121
           Y   +IGG+VGD +LGTKRT++LGA +L +GY +  +       +F ALG I VGNGLFK
Sbjct: 64  YGLISIGGYVGDHLLGTKRTIVLGALVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFK 123

Query: 122 PNAGNLVRKIYDGDDSKIDSAFTIYYMAVNVGSTFSMLLTPWIKDYVNANYGDGFGWHAA 181
            N  +L+ K Y   D ++D  FT++YM++N+GS  ++ L P I         D FG+   
Sbjct: 124 ANPASLLSKCYPPKDPRLDGTFTLFYMSINIGSLIALSLAPVI--------ADKFGYSVT 175

Query: 182 FAVCFVGLIVGIGNYMMMRHTLDNYGSEPDLLPVDKRKLAAVLGASLLAVVVSAVILEFE 241
           + +C  GLI+ +  Y+  R  + + GSEPD  P+   KL  VL  S++ + V A ++   
Sbjct: 176 YNLCGAGLIIALLVYIACRGMVKDIGSEPDFRPMSFSKLLYVLLGSVVMIFVCAWLMHNV 235

Query: 242 DIARVFVYGAGLVVLGIFIHLIRTSEESERAGLLAALVLTLQSVFFFIFYQQMSTSLALF 301
           ++A + +    +VV  IF       +++ R  +  A VL L++V F+I Y QM TSL  F
Sbjct: 236 EVANLVLIVLSIVVTIIFFRQAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFF 295

Query: 302 ALRNVDWDFVVMGQHLWTWSPAQFQALNPIWIMVLSPILAWAYAWGGKHNKDISIAAKFA 361
           A+ NV  +  ++G   ++ +P  FQALNP W+++ SPILA  Y   G   KD+S+  KF 
Sbjct: 296 AINNVHHE--ILG---FSINPVSFQALNPFWVVLASPILAGIYTHLGNKGKDLSMPMKFT 350

Query: 362 LGFAVVAAGFFIYSVAGEFAVN--GKTSSWVMIWGYGAYSLGELLVSGLGLAMIARYVPE 419
           LG  + + GF   + AG +  +  G TS W ++  Y   SLGEL +S LGLAMIA  VP+
Sbjct: 351 LGMFMCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQ 410

Query: 420 RMGGFMMGAYFVATGISQYLGGVVANFASVPQGITNPLETLTIYTSLFNKLGFAALGCTL 479
            + GF++G +F+    +  LGG VA F +VP  IT+PLETL +YT++F K+G   LG  +
Sbjct: 411 HLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470

Query: 480 IALAVLPLMRRLTETHHSH 498
           + L ++P ++R+  T  SH
Sbjct: 471 VMLLMVPWLKRMIATPESH 489