Pairwise Alignments

Query, 1899 a.a., omega-3 polyunsaturated fatty acid synthase PfaC (RefSeq) from Shewanella amazonensis SB2B

Subject, 1520 a.a., polyketide synthase from Agrobacterium fabrum C58

 Score =  186 bits (473), Expect = 2e-50
 Identities = 143/455 (31%), Positives = 214/455 (47%), Gaps = 36/455 (7%)

Query: 1   MAGRFPGADDADAFWSLITEGKDAHSPICQDKL-GAPVAAYLGEQGTSDRFYCDKGGYLR 59
           +AGRFPGADD DAFW L+ +G    + +    L  A V   L  Q    R +   GG+  
Sbjct: 45  LAGRFPGADDIDAFWQLLADGGSGLTAVTDADLESAGVDPQLAGQPDYVRVW---GGFSD 101

Query: 60  NFRFSPEGYAKPASAMAELATQVDEHQLWALDVAKLALQ--SLSSSPDKARCGVVMGTLS 117
              F   G+   A   A+L   +D  Q   L+ A  AL+     S   + R GV  G   
Sbjct: 102 PTAFDA-GFFGYAPREAQL---LDPQQRVFLECAWNALEHAGYGSGKSRGRTGVYAGG-- 155

Query: 118 FPTKASNRAFLPLYHRAVENGLKARLPGFPPLQPFDGQSELESQLWLQDTAADASALISE 177
               + N  F  ++                   P    S    Q  L + +   ++ ++ 
Sbjct: 156 ----SLNYHFTHIHS-----------------DPTLRDSVAPLQAGLGNVSGMIASRVAY 194

Query: 178 CLGLEGVSLSLDAACASSVYAIKLACDYLATGKADVMLAGAVSGADPFFISMGFSIFHAF 237
            L L+G S+ + A CA+ + ++ LA   L +G+ ++ +AGAVS   P      +      
Sbjct: 195 HLDLDGPSVGVQATCATGLVSVHLAVQALLSGECEMAVAGAVSVGQPKPAGYLYEAGGIG 254

Query: 238 PDHGLSAPLDKHSGGLYAGEGAGVLVLKRLDDAKRDGDTIHGIIRGVGLSNDGRGQFVLS 297
              G   P D  + G     G G ++LKRL DAK  GDT++ +I G  + NDG  +  L+
Sbjct: 255 APDGQCRPFDAAANGTIFTNGVGAVILKRLGDAKAAGDTVYAVIAGSAIGNDGSSKVGLT 314

Query: 298 -PASKGQIKAFERAYDEAGIAPGAVEVVECHATGTPLGDKVELTSLESFFESRLDGSAP- 355
            P+ KGQ    ++A   AGIAP AV+ VE HAT T +GD +ELT+L   +   L      
Sbjct: 315 APSVKGQASVLKKALANAGIAPSAVDYVEAHATATAIGDPIELTALNRIYGPSLRAEGRI 374

Query: 356 PLIGSVKSNLTHLLTAAGMPGIIKLMLAMKHKLLPPTVRLSSPLSSPRGLFGEDQMVTSA 415
            LIGS+K N+ H+  AAG+ G+IK +LA++H+ LP +   ++P S+     G  ++    
Sbjct: 375 CLIGSLKGNVGHMDAAAGIGGLIKTVLALRHECLPASGNFTTPSSACDFESGPFRVAAGK 434

Query: 416 RPWPAKTQNSACVAGLSVFGFGGCNAHLVLESPDA 450
             W A        A +S FG GG NAH+++E   A
Sbjct: 435 SDWKADADRPR-RAAISAFGMGGSNAHVIIEEAPA 468



 Score = 36.6 bits (83), Expect = 3e-05
 Identities = 103/472 (21%), Positives = 174/472 (36%), Gaps = 73/472 (15%)

Query: 471 LGIDGLAGHFGAATHVSELARLIKDNKHALVPLPEGRWK--GLEHLRDGSDATREANGGF 528
           + I GLAG F  A  +    +L+ D    L  + +   +  G++    G        GGF
Sbjct: 40  VAIIGLAGRFPGADDIDAFWQLLADGGSGLTAVTDADLESAGVDPQLAGQPDYVRVWGGF 99

Query: 529 IDSFELDFLRFRLPPHPGDRLVAQQLLLMKVADEAIRDAGLETGSKVAVLVAMETELELH 588
            D    D   F   P     L  QQ + ++ A  A+  AG  +G K      +     L+
Sbjct: 100 SDPTAFDAGFFGYAPREAQLLDPQQRVFLECAWNALEHAGYGSG-KSRGRTGVYAGGSLN 158

Query: 589 QFRGRVNLHTQLADSLARAGIVLSDDEYQALEQLAMDAVLPSASLNQYTSYIGNIMASRV 648
                ++    L DS+A     L +       ++A    L   S+    +    +++  +
Sbjct: 159 YHFTHIHSDPTLRDSVAPLQAGLGNVSGMIASRVAYHLDLDGPSVGVQATCATGLVSVHL 218

Query: 649 ASQWDFNGPAFTLSAGELSV---------------------ARALEVAGN-LFATQQLDA 686
           A Q   +G      AG +SV                      R  + A N    T  + A
Sbjct: 219 AVQALLSGECEMAVAGAVSVGQPKPAGYLYEAGGIGAPDGQCRPFDAAANGTIFTNGVGA 278

Query: 687 VVV-------AAVD-----LAGSAEKIWHWGNALQAMGLPPGEGAGALVLK-------TG 727
           V++       AA D     +AGSA  I + G++   +  P  +G  +++ K         
Sbjct: 279 VILKRLGDAKAAGDTVYAVIAGSA--IGNDGSSKVGLTAPSVKGQASVLKKALANAGIAP 336

Query: 728 SQGRYGALTAPVFSTPDKADVTGISE-HSPSGKL-GRMLDISHHSASARLGHSFAAANMA 785
           S   Y    A   +  D  ++T ++  + PS +  GR+  I   S    +GH  AAA + 
Sbjct: 337 SAVDYVEAHATATAIGDPIELTALNRIYGPSLRAEGRICLIG--SLKGNVGHMDAAAGIG 394

Query: 786 SLQHALLS-----LTLGENAGQPNAAVLLDGAAHSARVELSQSEIQREALNQRLINGLPA 840
            L   +L+     L    N   P++A   D  +   RV   +S+ + +A   R       
Sbjct: 395 GLIKTVLALRHECLPASGNFTTPSSA--CDFESGPFRVAAGKSDWKADADRPR------- 445

Query: 841 PQGKQLLQRIQLGGRDIRGHILSAELPFEAEIRAKLAQAAAGQAALPLPEKT 892
              +  +    +GG +   H++  E P     R + AQ  AG   LPL  ++
Sbjct: 446 ---RAAISAFGMGGSN--AHVIIEEAP----ARQQSAQGEAGALLLPLSARS 488