Pairwise Alignments
Query, 394 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B
Subject, 376 a.a., putative cyclic di-GMP phosphodiesterase from Azospirillum sp. SherDot2
Score = 96.7 bits (239), Expect = 1e-24
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 11/214 (5%)
Query: 178 LTDKLSDSLERTHASRRATVLGLARLSGFKDADSARHLNRIAKASELLTQALLSSPHRPD 237
L D++++ ++ AT+ +A L+ +D ++ H+ R L L P
Sbjct: 148 LEDRVAERTRDLLRAQDATIRAMASLAETRDNETGNHIRRTQNYVLALALHLSRDPRYAG 207
Query: 238 ELTPEFAENIGLSATLHDIGMIGVADNLQSKQLTMTPDMESERYKHTLIGDRLLGELLRE 297
+L E E + SA LHD+G +G+ D++ K ++ D H +G + +
Sbjct: 208 QLDEETIELLYKSAPLHDVGKVGIPDSILLKPGKLSDDEFHVMKTHAALGHDAIFAAEGQ 267
Query: 298 APDCV-----LLAMARDIAAYHHERWDGEGFPGKLKGKSIPLAARVVALIDTVDDLL--- 349
A + L +AR+IA HHERWDG G+P L G++IPL+AR++A+ D D L+
Sbjct: 268 ADLAIAGGSSFLRIAREIAHGHHERWDGTGYPQGLAGEAIPLSARLMAVADVYDALISRR 327
Query: 350 CHPDPRFRMTYEQARTHIKGLKGSILDPLLVDTF 383
C+ P +E+A + I+ GS DP +V F
Sbjct: 328 CYKPP---FPHEKAASIIREGSGSHFDPAVVAAF 358