Pairwise Alignments

Query, 499 a.a., transcription elongation factor NusA (RefSeq) from Shewanella amazonensis SB2B

Subject, 538 a.a., N-utilization substance protein A from Agrobacterium fabrum C58

 Score =  412 bits (1059), Expect = e-119
 Identities = 212/469 (45%), Positives = 312/469 (66%), Gaps = 5/469 (1%)

Query: 4   EILLVAEAVSNEKAVPREKIFEALETALATATKKKYEGDIDVRVAIDRKTGDYETFRRWM 63
           E+L +A+AV+ EK + RE +  A+  A+  A + +Y  + ++R  I+ KTG+    R   
Sbjct: 9   ELLQIADAVAREKVIDREIVLAAMADAIQKAARSRYGSETNIRADINSKTGEIRLQRLLE 68

Query: 64  VVEDNGEALENPYREITLEAAQYENPEIQVGEFIEDEIESVVFDRITTQTAKQVIVQKVR 123
           VVE    A E+   +I LE A+  NP+ ++G+FI D +  + F RI  Q+AKQVIVQKVR
Sbjct: 69  VVE----AAEDYSTQIPLELARDRNPDAKLGDFIADPLPPMDFGRIAAQSAKQVIVQKVR 124

Query: 124 EAERAQVVEQFYDKEGEIITGVVKKSNRDSVIVDLGNNADGVLYKEDLIARESFRPGDRV 183
           EAER +  ++F D+ GEI+ G VK+    +VIVDLG   +G++ ++++I RE+ R GDRV
Sbjct: 125 EAERDRQYDEFKDRIGEIVNGTVKRVEYGNVIVDLGRG-EGIIRRDEMIPRENMRYGDRV 183

Query: 184 RALLYAVRPEARGAQLYLTRTKPEMLIELFRVEVPEIADEMIQVMGAARDPGSRAKIAVK 243
           RA +Y VR E RG Q++L+RT P+ +++LF +EVPEI D +IQ+   ARDPGSRAKIAV 
Sbjct: 184 RAYVYDVRREQRGPQIFLSRTHPQFMVKLFTMEVPEIYDGIIQIKSVARDPGSRAKIAVI 243

Query: 244 SNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVLWDDNPAQFVINAMAPADVASIIVD 303
           SND  IDP+GACVGMRG+RVQAV  EL GE++DI+ W   PA F++NA+ PA+VA +++D
Sbjct: 244 SNDSSIDPVGACVGMRGSRVQAVVGELQGEKIDIIPWSQEPASFIVNALQPAEVAKVVLD 303

Query: 304 EDNHSMDIAVEADSLAQAIGRNGQNVRLATQLTGWELNVMTVADMNAKHQAESAKVVALF 363
           E++  +++ V  + L+ AIGR GQNVRLA+QLTGW++++MT  + + + Q E  +  ALF
Sbjct: 304 EESERIEVVVPDEQLSLAIGRRGQNVRLASQLTGWDIDIMTEQEESERRQKEFNERTALF 363

Query: 364 MASLDVDEDFAQVLADEGFTSLEEVAYVPVAELLAIDGFDEDIVEALRERAKAAISTRAL 423
           M +LDVDE   QVLA EGF  +EE+AYV + E+ +IDGFDED  + ++ RA+  +     
Sbjct: 364 MEALDVDEMVGQVLASEGFAQVEELAYVDLDEITSIDGFDEDTADEIQTRAREYLERLEA 423

Query: 424 ASEEALDGAEPSEELLNLEGMDRHLAFVLASRGVVTLEDLAEQGIDDLI 472
             +        ++EL  ++G+   +   L   G+ T+ED A    DDL+
Sbjct: 424 EMDAKRKELGVTDELRQIDGLTSQMMVALGEDGIKTIEDFAGCAADDLV 472