Pairwise Alignments

Query, 287 a.a., type IV pilus assembly protein PilM (RefSeq) from Shewanella amazonensis SB2B

Subject, 297 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  129 bits (324), Expect = 8e-35
 Identities = 86/242 (35%), Positives = 123/242 (50%), Gaps = 8/242 (3%)

Query: 4   RSWFYALFFSASFAGA----LPCQAADASLITTIPNSWQF-TLLTEALKRSGTNY---QI 55
           R +  AL  S S        L  +  DAS++   PN+  F  LL  AL++S   Y   Q+
Sbjct: 6   RQFLAALLLSLSLPSTATEPLTVRYVDASVMKRNPNNAYFGQLLQLALEKSKAKYGPYQL 65

Query: 56  SQLSSEMNQKRKVEEALEGNIDVFWSMTSAELERTVLPIRVPLFKGLLGNRLLIIREADQ 115
           + L  +++Q+R   E   G I+VFW+MT+   E   LP+RVPL KG+ G RLL   E D 
Sbjct: 66  APLDIDISQRRHFRELNNGVINVFWTMTNYRRELDALPVRVPLMKGVYGLRLLAANEHDL 125

Query: 116 GRFAKVKSKQDFSAFRAGQNRYWPDATIIESNGLPLITSYKYKNLYPMLEGGRFDYLALG 175
              A V+S  DF+ F   Q R WPD  I+  N L + T     ++Y              
Sbjct: 126 ATLAGVQSLGDFAPFTFLQGRDWPDTQILRLNRLEVSTDVSEGDMYEFTRRHPGYLFPRA 185

Query: 176 AQEIWDELAKHPDPALKVDSHVLLQYRSPAYFFVSPKRQALAEDLNRGLEAMIADGSFDR 235
             E++ E        L  +SH+L++Y +  YFFV+ +   LAE L  GL+A +ADGSFD+
Sbjct: 186 VTELYSETESRNISELAGESHLLIRYPAVMYFFVAKQDTLLAERLEYGLKAAMADGSFDQ 245

Query: 236 MF 237
           +F
Sbjct: 246 LF 247