Pairwise Alignments

Query, 457 a.a., signal recognition particle protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 458 a.a., Signal recognition particle protein from Pseudomonas sp. DMC3

 Score =  675 bits (1742), Expect = 0.0
 Identities = 338/453 (74%), Positives = 399/453 (88%), Gaps = 2/453 (0%)

Query: 1   MFENLTDRLSRTLKTISGRGRLTEDNIKDTLREVRMALLEADVALPVVREFVNAVKERAV 60
           MFENLTDRLS+TL+ ++G+ +LTEDNIKDTLREVRMALLEADVALPVV++FVN+VKERAV
Sbjct: 1   MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNSVKERAV 60

Query: 61  GQDVAKSLTPGQVFVKIVQSELEKAMGEANEALNLAAQPPAVIMMAGLQGAGKTTSVAKL 120
           G +V++SLTPGQ FVKIVQ+ELE  MG ANE LNL+A PPAVI+MAGLQGAGKTT+  KL
Sbjct: 61  GTEVSRSLTPGQAFVKIVQAELESLMGAANEDLNLSAVPPAVILMAGLQGAGKTTTAGKL 120

Query: 121 SKFLRTRQKKSVLVVSADVYRPAAIKQLETLAKEVEVEFFPSDVSQKPIDIANAAISHAK 180
           ++FL+ R+KKSV+VVSAD+YRPAAIKQLETLA ++ V FFPSD+SQKP+DIANAAI  AK
Sbjct: 121 ARFLKERKKKSVMVVSADIYRPAAIKQLETLANDIGVTFFPSDLSQKPVDIANAAIKEAK 180

Query: 181 LKFIDVVILDTAGRLHVDEAMMDEIKALHAAVKPIETLFVVDAMTGQDAANTAKAFNEAL 240
           LKFIDVVI+DTAGRLH+DE MM EIKALHAA+ P+ETLFVVDAMTGQDAANTAKAF +AL
Sbjct: 181 LKFIDVVIVDTAGRLHIDEEMMGEIKALHAAINPVETLFVVDAMTGQDAANTAKAFGDAL 240

Query: 241 PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV 300
           PLTGV+LTKVDGDARGGAALS+R ITGKPIKF+G+GEK++AL+PFHP+R+ASRILGMGDV
Sbjct: 241 PLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSEALDPFHPERIASRILGMGDV 300

Query: 301 LSLIEQVERGVDKEKAMKLASKVKSGGNFDLEDFREQLQQMKNMGGMMGLLEKLPGVGQL 360
           LSLIEQ E  +DK+KA KLA K+K G  FDLEDFR+QLQQMKNMGG+ GL++KLP +G +
Sbjct: 301 LSLIEQAEATLDKDKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPSIGGV 360

Query: 361 PPEAMAQIQDG--KMTRQMEAIINSMTPGERQNPDIIKGSRKRRIAAGSGTQIQDVNRLL 418
               M   Q+   K  +QMEAIINSMTP ER++P++I GSRKRRIA GSGTQ+QD+ RL+
Sbjct: 361 NLSQMGNAQNAAEKQFKQMEAIINSMTPAERRDPELISGSRKRRIAMGSGTQVQDIGRLI 420

Query: 419 KQFTQMQKMMKKMSSKGGMQKMMRAMGGMMPGG 451
           KQ  QMQKMMKK ++KGGM KMMR MGGM+PGG
Sbjct: 421 KQHKQMQKMMKKFTAKGGMAKMMRGMGGMLPGG 453