Pairwise Alignments

Query, 457 a.a., signal recognition particle protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 528 a.a., signal recognition particle protein from Bosea sp. OAE506

 Score =  441 bits (1133), Expect = e-128
 Identities = 245/464 (52%), Positives = 315/464 (67%), Gaps = 8/464 (1%)

Query: 1   MFENLTDRLSRTLKTISGRGRLTEDNIKDTLREVRMALLEADVALPVVREFVNAVKERAV 60
           MF  L+DRLS  L  ++ RG LTE+++   LREVR ALLEADVAL VVR F + V+ERAV
Sbjct: 1   MFGTLSDRLSGILSGLTRRGSLTEEDVNAALREVRKALLEADVALEVVRSFTDKVRERAV 60

Query: 61  GQDVAKSLTPGQVFVKIVQSELEKAMGEANEALNLAAQPPAVIMMAGLQGAGKTTSVAKL 120
           G +V KS+TPGQ  +KIV   L   +G   E +   A PP  I+M GLQG+GKTTS AK+
Sbjct: 61  GAEVLKSVTPGQQVIKIVNDALIDMLGGDGEGITFDAVPPVPILMVGLQGSGKTTSTAKI 120

Query: 121 SKFLRTRQKKSVLVVSADVYRPAAIKQLETLAKEVEVEFFPSDVSQKPIDIANAAISHAK 180
           +K L  R KK VL+ S D  RPAA++QL  L K+V VE  P    Q  + IA  AI  A+
Sbjct: 121 AKRLTDRAKKRVLMASLDTRRPAAMEQLAILGKQVGVETLPIVAGQSAVQIARRAIEAAR 180

Query: 181 LKFIDVVILDTAGRLHVDEAMMDEIKALHAAVKPIETLFVVDAMTGQDAANTAKAFNEAL 240
           L   DVV+LDTAGR+ +D+ +M E+  + AA  P E L V DA+TGQDA NTA+AF+  +
Sbjct: 181 LGGYDVVMLDTAGRVTLDDTLMAEVAEVKAATNPHEVLLVADALTGQDAVNTARAFDARV 240

Query: 241 PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV 300
            LTG+VLT++DGD+RGGAALS+R +TGKPIK +G GEK DALE FHP RVA+RILGMGD+
Sbjct: 241 GLTGIVLTRMDGDSRGGAALSMRAVTGKPIKLVGTGEKIDALEDFHPSRVANRILGMGDI 300

Query: 301 LSLIEQVERGVDKEKAMKLASKVKSGGNFDLEDFREQLQQMKNMGGMMGLLEKLPGVGQL 360
           +SL+E+    VD +KA  LA ++ + GNFDL D R QLQQM+ MGG+ G++  LPG+ Q+
Sbjct: 301 VSLVERAAETVDADKAQALAQRL-AKGNFDLADMRMQLQQMEKMGGLGGVMGMLPGMKQM 359

Query: 361 PPEAMAQIQDGKMTRQMEAIINSMTPGERQNPDIIKGSRKRRIAAGSGTQIQDVNRLLKQ 420
             +      + KM R+  AII+SMT  ER+NPD++K SRK+RIAAGSGT  + +N+LLK 
Sbjct: 360 QGQLANSGVNDKMIRRQIAIIDSMTAAERKNPDLLKNSRKKRIAAGSGTSPEAINKLLKM 419

Query: 421 FTQMQKMMKKMS-SKGGMQKMMRAM----GGM--MPGGMKLPGR 457
              M  MMK MS  KGGM   +  M    GGM  +P GM  P +
Sbjct: 420 HRGMADMMKAMSKQKGGMLGKLGQMFGLGGGMGGLPAGMPDPSK 463