Pairwise Alignments

Query, 262 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 263 a.a., predicted inner membrane protein (RefSeq) from Escherichia coli BW25113

 Score =  215 bits (547), Expect = 9e-61
 Identities = 113/262 (43%), Positives = 172/262 (65%), Gaps = 2/262 (0%)

Query: 1   MVLFSASAMFFYCIALILVTSRLFHAEGPNRRAVAAVASIAVVLHAAALQQAIFTD--DG 58
           M +F+  A+  Y ++L L+   L    G  RR     A IA+V HA AL+  I  D   G
Sbjct: 1   MPVFALLALVAYSVSLALIVPGLLQKNGGWRRMAIISAVIALVCHAIALEARILPDGDSG 60

Query: 59  QNFSLTNVISLVNWIIAFTFSVLIFRLKVIVVVPVVYACSVLSVALLWLVPPKYITHFEH 118
           QN SL NV SLV+ +I    +++  R +  +++P+VYA +++++AL   +P +YITH E 
Sbjct: 61  QNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALINLALATFMPNEYITHLEA 120

Query: 119 NPEVLAHVVLSLMAYSALMIAALYAIQLAMIQNKLKKKQLILSPAMPPLMTVEKQLYHLV 178
            P +L H+ LSL +Y+ L+IAALYA+QLA I  +LK K+L  +  MPPLM++E++++H+ 
Sbjct: 121 TPGMLVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKLAFNQEMPPLMSIERKMFHIT 180

Query: 179 IIGVILLSLGLATGFIFLDDMFAEGKGHKAILSIMAWFVYIAMLWQQYSVGCRIRTAIAY 238
            IGV+LL+L L TG  ++ ++F+     KA+LSI+AWFVYI +LW  Y  G R R  + +
Sbjct: 181 QIGVVLLTLTLCTGLFYMHNLFSMENIDKAVLSIVAWFVYIVLLWGHYHEGWRGRRVVWF 240

Query: 239 TLTGATLLSLAYFGARIVKELI 260
            + GA +L+LAYFG+RIV++LI
Sbjct: 241 NVAGAVILTLAYFGSRIVQQLI 262