Pairwise Alignments

Query, 207 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 205 a.a., UPF0126 family inner membrane protein from Escherichia coli BL21

 Score =  144 bits (364), Expect = 9e-40
 Identities = 73/192 (38%), Positives = 111/192 (57%), Gaps = 1/192 (0%)

Query: 9   LCGTAVFALTGALAAGRHRMDPFGVTVLAAVTAVGGGTIRDAIIGATPVFWLRDPNYLIV 68
           L G    A+TGALAAGR RMD FGV ++A  TA+GGG++RD ++G  P+ W++ P Y+I+
Sbjct: 8   LVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGHYPLGWVKHPEYVII 67

Query: 69  ILATVGFTLVFIRRPRKVPQYTLPIADALGLALFTVIGAQKALSLGLNGMSAVIMGLITG 128
           + AT       +       +    + DALGL +F++IGAQ AL +G   + AV+  + TG
Sbjct: 68  V-ATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSIIGAQVALDMGHGPIIAVVAAVTTG 126

Query: 129 VGGGIIRDVLCRQIPMVLRTEIYATASILGGIAYTLSLQLGMNSQTALWLSMLSALILRL 188
           V GG++RD+ C++IP+V + E+YA  S    + Y        N    +  +++     RL
Sbjct: 127 VFGGVLRDMFCKRIPLVFQKELYAGVSFASAVLYIALQHYVSNHDVVIISTLVFGFFARL 186

Query: 189 AAIRWHLSLPAF 200
            A+R  L LP F
Sbjct: 187 LALRLKLGLPVF 198



 Score = 32.7 bits (73), Expect = 5e-06
 Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 9/114 (7%)

Query: 4   FYFFDLCGTAVFALTGALAAGRHRMDPFGVTVLAAVTAVGGGTIRDAIIGATPVFWLRDP 63
           F   D  G  VF++ GA  A      P    V A  T V GG +RD      P+ + ++ 
Sbjct: 89  FLVLDALGLVVFSIIGAQVALDMGHGPIIAVVAAVTTGVFGGVLRDMFCKRIPLVFQKE- 147

Query: 64  NYLIVILATVGF--TLVFIRRPRKVPQYTLPIADALGLALFTVIGAQKALSLGL 115
                + A V F   +++I     V  + + I   L    F  + A + L LGL
Sbjct: 148 -----LYAGVSFASAVLYIALQHYVSNHDVVIISTLVFGFFARLLALR-LKLGL 195



 Score = 30.8 bits (68), Expect = 2e-05
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)

Query: 91  LPIADALGLALFTVIGAQKALSLGLNGMSAVIMGLITGVGGGIIRDVLCRQIPM--VLRT 148
           L I   +G+    + GA  A    ++    +I+   T +GGG +RD+L    P+  V   
Sbjct: 3   LHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGHYPLGWVKHP 62

Query: 149 E---IYATASIL 157
           E   I ATA++L
Sbjct: 63  EYVIIVATAAVL 74