Pairwise Alignments

Query, 369 a.a., anhydro-N-acetylmuramic acid kinase (RefSeq) from Shewanella amazonensis SB2B

Subject, 363 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  178 bits (452), Expect = 2e-49
 Identities = 128/365 (35%), Positives = 179/365 (49%), Gaps = 30/365 (8%)

Query: 10  MSGTSMDGVDAVLVDFDTPSPKLIATHTEAIPEHLFKGLQRLCQPG----------QDEV 59
           MSGTSMDG+D  ++  D  S   +  H  +       GL+ + Q            ++  
Sbjct: 1   MSGTSMDGIDIAVLRTDGES---VVRHGPSGYFPYDPGLRGIWQKALTTAKAIRERRERP 57

Query: 60  NRLGRLDRSVGSLFAKAVNNLLASSGIDKSQVVAIGSHGQTVRHMPNLEVGFTVQIGDPN 119
             LG  +R +    A AV + L     D   +  IG HGQTV H P  +   TVQIGD  
Sbjct: 58  GDLGEAERKLTLAHAAAVKSFLHRHRFDVGDIDVIGFHGQTVLHRP--DEALTVQIGDGA 115

Query: 120 TIAAETGIDVIADFRRKDIALGGQGAPLVPAFHQQIFAKA----DKRRVILNIGGIANIT 175
            +A ETGIDV+ D R  D+  GGQGAPL+PA+H  + A      +   V +NIGGI+N+T
Sbjct: 116 LLAEETGIDVVYDMRANDMVHGGQGAPLIPAYHMALSANLPDGFETPAVFVNIGGISNLT 175

Query: 176 WLPGNAEAVLGFDTGPGNTLIDGWIQQVKQQAFDRDGAFAASGKTDNTLLAQLLSHPYFM 235
           ++ G    +  FD+GPGN LID WI+    +AFD+ G  AA G    +L+A+ +  P+F 
Sbjct: 176 YI-GEGGRLAAFDSGPGNMLIDQWIEAHTGKAFDKGGRTAAGGSVVASLVARYMESPFFS 234

Query: 236 QPYPKSTGRELFNNAWLEQQLEKFGHLDEADIQSTLLDLTCHSIAADILKLSNSGELF-V 294
               +S  R  F          + G +  AD   TL  LT  +I      L  + + + V
Sbjct: 235 ANIRRSLDRSDF-------VPPQKGEVSLADGARTLSHLTGAAILKSASYLPEAAKTYVV 287

Query: 295 CGGGALNIELMNRLQALL--PGFTLTTTSVLGVDPKWVEAIAFAWLALRHHQGLPANLPA 352
           CGGG LN  +M  L  L    G  +      G D   +EA A+A+LA+R  +GLP   P 
Sbjct: 288 CGGGRLNPVIMEELAGLAAKQGARVIAAEEAGFDGGAMEAEAWAYLAVRSLRGLPLTYPG 347

Query: 353 VTGAR 357
            TG +
Sbjct: 348 TTGVK 352