Pairwise Alignments

Query, 319 a.a., ABC transporter, ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 308 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  240 bits (612), Expect = 4e-68
 Identities = 133/304 (43%), Positives = 188/304 (61%), Gaps = 7/304 (2%)

Query: 12  IEGLKKTYKGGVEAVKGISLEVAKGDFFALLGPNGAGKSTTIGIISSLVQKSSGKVEVFG 71
           I  L K+Y  G +A+KG+SL++ +G+  ALLGPNGAGK+T I I+  LV    G V V G
Sbjct: 7   IRNLTKSYANGFQALKGVSLDIKEGEILALLGPNGAGKTTLISIVCGLVNPGEGSVLVGG 66

Query: 72  HDIDRQLEAAKLCIGLVPQEFNFNQFETVLQIVVNQAGYYGVPRPEALLRAEKYLSALDL 131
           H++ +     +  IGLVPQE   + FETV   V    G +G  +  AL+  E  L +L L
Sbjct: 67  HNVVKDFRQTRALIGLVPQELTTDMFETVWNTVSFSRGLHGQKKNPALI--ESILKSLSL 124

Query: 132 WDKRNSPSRQLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWSFLTELNRQG 191
           WDK+++  R+LSGGMKRR++IA+AL HEPK+L LDEPTAGVD+ LRR MW+ ++EL  +G
Sbjct: 125 WDKKDNMLRELSGGMKRRVLIAKALAHEPKVLFLDEPTAGVDVTLRRDMWNVVSELRAKG 184

Query: 192 VTIILTTHYLEEAEMLCRNIGIIDKGELVECTSMKKLLAKLNMETFILDLKQDVDALP-A 250
           VTIILTTHY+EEAE +   +G+I+ GEL+       L+ KL  +   L+L Q V+ LP +
Sbjct: 185 VTIILTTHYIEEAEEIADRVGVINGGELLLVEEKTALMKKLGRKQLFLELTQPVERLPDS 244

Query: 251 LDGIQCRLIDNH---TLEVD-IAKEHSLNQLFAQLSEQGIEVLSMRNKANRLEELFVALV 306
           L      L D+    T E++   ++  +  L   LS   I    +  + + LE++FV+LV
Sbjct: 245 LAPFALTLSDDRSTITYEIEGNGEQGRIADLLGALSAANIHFKDISTRQSSLEDIFVSLV 304

Query: 307 EGAK 310
            G K
Sbjct: 305 GGQK 308