Pairwise Alignments

Query, 262 a.a., ROK family protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 387 a.a., Xylose-responsive transcription regulator, ROK family from Variovorax sp. SCN45

 Score = 64.7 bits (156), Expect = 3e-15
 Identities = 62/240 (25%), Positives = 99/240 (41%), Gaps = 23/240 (9%)

Query: 29  PTGDGFSIRDLNEQIQAFEQDFALEHYRLAMAVPGLVRDNRLVTCKSLPGL----TGLHP 84
           P G    +  +    QA  +   L    + + VPG V D   V  +  P L      L P
Sbjct: 118 PAGACAQVARMASVAQARLEQLGLRLSSIGVCVPGAVDDCTGVV-RFAPNLGWRNVSLLP 176

Query: 85  AQIQCSGELAF------IANDMDAGI-------QAIAEPRHDCEVLVMCGAGLGMAIAMN 131
           A  +  G +        + ND DA +        ++ +   D  + V C  G+G  + +N
Sbjct: 177 ALEKAFGAVGLPRVTVQLQNDADAAVLGEYEFAASVGQEGEDPLIFVNCDVGVGAGVVLN 236

Query: 132 GQVFSGASGFAGELGHCRIMTEGGEFSLEQLASAEALRGRKQV--VGDDLAQAGRHLGMG 189
            ++F+GA G AGE+GH  +  +G E S  +   AEA  G + +   G D+ +A    G+ 
Sbjct: 237 DRLFTGAQGMAGEIGHTILELDGPECSCGRRGCAEAFFGSRVLRREGRDMQRAAAFFGVM 296

Query: 190 LAWVVNLFNPNRIYLAGSM-MHSADFYKGCIGALRDMA--LGAPMANCQVHRVDDMETLV 246
           L  +   FNP  I L G +     DF +    ++   A   G P  + +  R D +   V
Sbjct: 297 LQNLWVTFNPRAIVLGGKVCTDHRDFVQAAFESVHRHADRAGMPAPDLRTARYDALAPAV 356