Pairwise Alignments

Query, 201 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 195 a.a., penicillin-binding protein activator LpoB from Pseudomonas fluorescens SBW25

 Score =  140 bits (353), Expect = 2e-38
 Identities = 75/171 (43%), Positives = 105/171 (61%), Gaps = 6/171 (3%)

Query: 27  VEYGDATEVETVNENFGSTDLQAITAKMVDSMLTFPPVVAMTAKQRPIIFVDKIKNKTSE 86
           + YGD   VE V   FGSTDLQ I   M  S+       +   + RP++ V  +KNKTSE
Sbjct: 30  ISYGDTKAVELVTNEFGSTDLQMIAESMTRSLAQ-----SGILQGRPVVQVYDVKNKTSE 84

Query: 87  HIDTESVTDSISNKLLRSGKFRFI-DMTKVDAVRKQLDYQNNSGMVDPSTAIRFGRQIGA 145
           +IDT  +T SI  +L+++G  RF  D T + +   QL  QN SG+   ST  + G  + A
Sbjct: 85  YIDTREITTSIKTQLMKTGTARFASDNTDMQSQVDQLKLQNQSGLYKKSTVSKTGNMVAA 144

Query: 146 QYMLYGNLSSIVKQEGSTKDVYYKMTMRLMDLETGLIEWSDEKEIRKTKSK 196
           +Y L G++SSIVK+    KDV+YK +++L+D+E+GL EW DEKEIRKT  +
Sbjct: 145 KYRLEGSISSIVKRSSDYKDVFYKFSLQLIDVESGLAEWMDEKEIRKTTER 195