Pairwise Alignments

Query, 355 a.a., outer membrane porin, putative (RefSeq) from Shewanella amazonensis SB2B

Subject, 351 a.a., outer membrane porin, putative (RefSeq) from Shewanella amazonensis SB2B

 Score =  204 bits (518), Expect = 4e-57
 Identities = 133/363 (36%), Positives = 199/363 (54%), Gaps = 29/363 (7%)

Query: 4   SLIASAVATGAALSSFATLADGPAFYGRVDLAATNSNTGYATQNQKDGTVFENNFSWLGV 63
           SL+++++  G +L + AT    P FYGR+D + T+S+TG AT    DGTV ENNF+ LGV
Sbjct: 7   SLLSASLLAGVSLHAQAT----PDFYGRIDYSVTHSDTGAATHKGLDGTVLENNFTRLGV 62

Query: 64  KGSEKLSQNVALIYQMEFGVNNFDNSGDT--FNTRNTFVGLQ-TQAGTALIGRNDSVFKQ 120
           +G+E L++ + L YQ+E GV++   SG++  F  R TF+G++    G+   GR + VFK 
Sbjct: 63  RGTEALTEGLTLFYQVEMGVDSASESGNSKPFTARPTFIGIRHANWGSLAAGRMEPVFKM 122

Query: 121 SEGGFDLFGNTNADIDLLVAGQSRLGDSITYYSPKIAHILTLNATYVMEDNYEEGSWFNP 180
           ++G  D+F N +   D L+AG  R GDS  Y +P + H   L A+ ++EDNY + S    
Sbjct: 123 TKGFVDVFDNYSMKHDRLMAGDKRWGDSFEYKTP-VWHGWQLGASLLLEDNYYQDS---- 177

Query: 181 GEDDEWSGNTYALSATLGDKALKAQNYYVAAAYNDGLDGIKAYRGVAQVKFG-----ELV 235
             D       Y L+ T GDK LK  + Y AAAY+DG++ IKA+R V   K        L 
Sbjct: 178 --DKRKENGNYQLALTYGDKKLKNSDLYFAAAYSDGVEDIKAWRAVGHWKLASLGLENLK 235

Query: 236 LGALYQNSE--HVADKY-SNLEGDTWFINAGYKLGNTTLKASYGQDDSGLGKYVGRMVGD 292
           LG L Q SE  + A  Y  + +G  + ++  YK      KA YG+D+SG G    R+   
Sbjct: 236 LGTLIQQSELANPAKPYWQDRDGLGFIVSGSYKWDKWLFKAQYGKDESGTGLIANRVYSA 295

Query: 293 SDVGMEQVENVDLQQYTLGADHRLSKNTLVYGHFTRFDGDMLLGGNKVSLEDDVITLGLR 352
                 QV +V   Q+ +GA++  SK+T V+    +FD            +D + ++G+R
Sbjct: 296 LGEAATQVPHV--SQWGVGAEYFFSKSTRVHLEVGQFDTKQY-----AEFDDTITSIGIR 348

Query: 353 VDF 355
            DF
Sbjct: 349 YDF 351