Pairwise Alignments

Query, 355 a.a., outer membrane porin, putative (RefSeq) from Shewanella amazonensis SB2B

Subject, 308 a.a., porin (RefSeq) from Shewanella amazonensis SB2B

 Score =  136 bits (342), Expect = 8e-37
 Identities = 95/332 (28%), Positives = 167/332 (50%), Gaps = 53/332 (15%)

Query: 3   KSLIASAVATGAALSSFATLADGPAFYGRVDLAATNSNTGYATQNQKDGTVFENNFSWLG 62
           K+L+ SA+ T A+L+S A  A+    YG++++   +++    ++     TV ++N S LG
Sbjct: 7   KTLLVSAL-TAASLAS-AQAAEPLTVYGKLNVTVQSNDEAGESE-----TVVQSNASRLG 59

Query: 63  VKGSEKLSQNVALIYQMEFGVNNFDNSGDTFNTRNTFVGLQTQAGTALIGRNDSVFKQSE 122
           VKG+ +LS ++   Y +E+ V+   ++ + F  RN FVGL+   G   +GRND++ K ++
Sbjct: 60  VKGAFELSSSLEAFYTIEYEVDAGSDAKENFLARNQFVGLKGNFGALSVGRNDTMLKIAQ 119

Query: 123 GGFDLFGNTNADIDLLVAGQSRLGDSITYYSPKIAHILTLNATYVMEDNYEEGSWFNPGE 182
           G  D F + + D+  L  G++R+  ++TY SP+      + ATY       EG+    GE
Sbjct: 120 GKVDQFNDLSGDLKSLFKGENRIEQTVTYLSPEFGG-FKVGATYA-----AEGAKSQAGE 173

Query: 183 DDEWSGNTYALSATLGDKALKAQNYYVAAAYNDGLDGIKAYRGVAQVKFGELVLGALYQN 242
           D       ++L+A  GD +LK   +Y + AY+  + G    R   Q K   LVLG +YQ 
Sbjct: 174 DG------FSLAAMYGDASLKKSAFYASVAYDSEVKGYDILRATVQAKLAGLVLGGMYQQ 227

Query: 243 SEHVADKYSNLEGDT---WFINAGYKLGNTTLKASY-GQDDSGLGKYVGRMVGDSDVGME 298
            E       +++GD+   + ++A Y + + TLK  +   +D G                 
Sbjct: 228 EE------KSVDGDSKTGYLVSAAYNIADVTLKGQFQDMEDKG----------------- 264

Query: 299 QVENVDLQQYTLGADHRLSKNTLVYGHFTRFD 330
                    +++GAD++L K T ++  +T  D
Sbjct: 265 -------DSWSIGADYKLGKPTKIFAFYTSRD 289