Pairwise Alignments

Query, 355 a.a., outer membrane porin, putative (RefSeq) from Shewanella amazonensis SB2B

Subject, 361 a.a., outer membrane porin, putative (RefSeq) from Shewanella amazonensis SB2B

 Score =  355 bits (911), Expect = e-102
 Identities = 186/376 (49%), Positives = 248/376 (65%), Gaps = 36/376 (9%)

Query: 1   MKKSLIASAVATGAALSSFATLADGPAFYGRVDLAATNSNTGYATQN------------- 47
           MKK+LI+++VA+  AL+SF  LA+GP FYGR+DL+ TN++ G   Q+             
Sbjct: 1   MKKTLISASVASVMALASFGALAEGPQFYGRLDLSVTNTDVGTTVQSGTKGINTNDFANE 60

Query: 48  QKDGTVFENNFSWLGVKGSEKLSQNVALIYQMEFGVNNFDNSGDTFNTRNTFVGLQTQAG 107
              GT  ENNFSWLGVKG+E +S  + ++YQMEF V N   SGDTF  RNT++G++T AG
Sbjct: 61  NNSGTYIENNFSWLGVKGTENISSGIDIVYQMEFQVENTSGSGDTFKPRNTYLGIKTSAG 120

Query: 108 TALIGRNDSVFKQSEGGFDLFGNTNADIDLLVAGQSRLGDSITYYSPKIAHILTLNATYV 167
           T L+GRND+VFKQSEGG DLFGNTNADID LVA Q+R  D I YYSP IA ++TLNATY+
Sbjct: 121 TVLVGRNDTVFKQSEGGVDLFGNTNADIDRLVAAQTRSADGIWYYSPVIADLVTLNATYL 180

Query: 168 MEDNYEEGSWFNPGEDDEWSGNTYALSATLGDKALKAQNYYVAAAYNDGLDGIKAYRGVA 227
           MED        N G DD      YALS T+GDK LK  N+Y+A AYN G+  + AYR VA
Sbjct: 181 MED--------NNGSDDA----QYALSVTVGDKGLKKHNFYLAGAYNKGISNVDAYRAVA 228

Query: 228 QVKFGELVLGALYQNSEHVADKYSNLEGDTWFINAGYKLGNTTLKASYGQDDSGLGKYVG 287
           QVK G+  +G L+QN+E V    S  + +T+F+N  Y L    LKA YG D+SG+GKY G
Sbjct: 229 QVKLGDFKVGGLFQNTEKVD---SGNDNNTYFVNVAYNLNGVNLKAEYGYDESGMGKYYG 285

Query: 288 RMVGDSDVGMEQVEN-------VDLQQYTLGADHRLSKNTLVYGHFTRFDGDMLLGGNKV 340
            +V  ++V   +V N       +++   TLGAD+R +K+TL++ H+  ++G  +  G +V
Sbjct: 286 NVVKYTEVVDGKVVNKTLSGSDIEVTNITLGADYRAAKSTLLFAHYAMYEGSHVTAGQRV 345

Query: 341 SLEDD-VITLGLRVDF 355
            L+DD V T+G+R DF
Sbjct: 346 DLQDDNVFTVGVRYDF 361