Pairwise Alignments

Query, 942 a.a., excinuclease ABC, A subunit (RefSeq) from Shewanella amazonensis SB2B

Subject, 981 a.a., excinuclease ABC subunit UvrA from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 1100 bits (2844), Expect = 0.0
 Identities = 566/947 (59%), Positives = 719/947 (75%), Gaps = 10/947 (1%)

Query: 4   IEIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63
           I +RGAR HNLK ++L IPR++L+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQ
Sbjct: 8   IRVRGAREHNLKGVDLDIPREQLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 67

Query: 64  FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLFARVGEPRCPTH 123
           FL LM KPDVD IEGLSPAISIEQK+TS NPRSTVGT+TE++DY+RLL+ARVG P  P  
Sbjct: 68  FLELMGKPDVDLIEGLSPAISIEQKTTSKNPRSTVGTVTEIHDYMRLLWARVGVPYSPAT 127

Query: 124 GQPLAAQTVSQMVDKVLERPEGEKLMLLAPVVKARKGEHVKLLDSLSAQGYIRARIDGEV 183
           G P+ +QTVSQMVDK++  P+GE+++LLAPVV+ RKGE+ K +     QG+ R +IDG+ 
Sbjct: 128 GLPIESQTVSQMVDKLVALPDGERILLLAPVVRGRKGEYKKEIAEWQRQGFQRLKIDGQF 187

Query: 184 CDLSDPPTLDLHVKHTIEVVVDRFKVKDDMQQRLAESFETTLELSGGIAVV--ASMEEG- 240
             + + PTLD   KH I++VVDR   K D + R A+S +T L L+ GIA    AS  EG 
Sbjct: 188 YPIDEAPTLDKKFKHDIDIVVDRIVTKPDQEARYADSLQTALGLADGIANAEWASTAEGE 247

Query: 241 -AAEEMIFSANFACPHCGYSMAELEPRIFSFNNPAGACQTCDGLGVQQFFDPERVIVSGE 299
            A   ++FS  FACP  G++++E+EPR+FSFNNP GAC  CDGLGV+  FD + VI   +
Sbjct: 248 TAPRSILFSERFACPVSGFTISEIEPRLFSFNNPFGACPVCDGLGVKLAFDADLVIPDRD 307

Query: 300 LSLAGGAVRGWDRR-NFYYFQMLKSLAEHYEFDVEAPFSELTAKVQKIVLYGSGKEEVAF 358
            +L  GAV  W R  +  Y Q L+SL+ HY F ++ P+ +L A+  K +L+G+G E++ F
Sbjct: 308 KTLHKGAVAPWARGPSPLYTQTLQSLSLHYGFSMDKPWRDLPAQAHKAILHGTGSEKIKF 367

Query: 359 RYVNDRGDVVVRKHPFEGILNNMDRRYRETESNTVREELAKYISNQACSSCGGSRLREEA 418
            Y ++     V K PFEG+L N++RR+RET+S  VREELA+Y S   C +C G RL+ EA
Sbjct: 368 VYDDNARKYEVSK-PFEGVLPNLERRWRETDSAWVREELARYQSETPCDACHGKRLKPEA 426

Query: 419 RHVFIEDLNLPTLTHWSIGEAMDYFNKLE--FEGQKAQIAEKILKEVRDRLGFLVNVGLN 476
             V +   ++  ++  SI +A  +F+ LE     ++ +IA +ILKE+ DRL FL NVGL+
Sbjct: 427 LAVKVGGEDIADISTLSISKAYLWFSTLEENLTEKQMEIARRILKEICDRLRFLNNVGLD 486

Query: 477 YLSLARSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLTHLRD 536
           YL+L+RS+ TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLHQRDN RLL +L  LRD
Sbjct: 487 YLNLSRSSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNTRLLESLKGLRD 546

Query: 537 LGNTVIVVEHDEDAIRMADHIIDIGPGAGVHGGEVICDGDLAAITACEHSVTGQYISGKR 596
           LGN+V+VVEHDE+AI  AD++ID+GP AGVHGG+V  +G  A + A   S+TG+Y++G+R
Sbjct: 547 LGNSVLVVEHDEEAILTADYVIDMGPAAGVHGGQVCAEGTPAQVMANPKSLTGKYLTGER 606

Query: 597 KIQVDG-GRTPINPEQLIELRGARGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFF 655
           +I++   GR PIN ++++++ GA GNNLK+V   IPVG+FTC+TGVSG GKST   +T +
Sbjct: 607 EIEIPAEGRRPINRKRMLKISGASGNNLKSVTGEIPVGVFTCITGVSGGGKSTFTIETLY 666

Query: 656 KIAHKALNGATVDEPAPYTSITGLEQCDKVVDIDQSPIGRTPRSNPATYTGIFTPIRELF 715
           K A + LN A+ + PAP+  I GLE  DKV+DIDQSPIGRTPRSNPATYTG F PIR+ +
Sbjct: 667 KAAARRLNNAS-EAPAPFDRIEGLEHFDKVIDIDQSPIGRTPRSNPATYTGAFGPIRDWY 725

Query: 716 AGTQESRTRGYQVGRFSFNVKGGRCEACQGDGLIKVEMHFLPDVYVPCDSCKGKRYNRET 775
           AG  ES+ RGY  GRFSFNVKGGRCEACQGDG+IK+EMHFLPDVYV CD CKGKRYNRET
Sbjct: 726 AGLPESKARGYGPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCKGKRYNRET 785

Query: 776 LEVKYKGKNIHEVLQMTVEDARTFFDAVPAIARKLQTLMDVGLSYIRLGQSATTLSGGEA 835
           LE+ +KGK+I +VL MTVE+A +FF AVP I  K+ TL  VGL Y+++GQ ATTLSGGEA
Sbjct: 786 LEIVFKGKSISDVLDMTVEEAASFFKAVPPIRDKMLTLERVGLGYVKVGQPATTLSGGEA 845

Query: 836 QRVKLAKELSKRDTGKTLYILDEPTTGLHFADIQLLLDVLHRLKSHGNTIVVIEHNLDVI 895
           QRVKL+KELSKR TG+TLYILDEPTTGLHF D + LL+VL  L   GNTIVVIEHNLDVI
Sbjct: 846 QRVKLSKELSKRATGRTLYILDEPTTGLHFEDTRKLLEVLQELVEAGNTIVVIEHNLDVI 905

Query: 896 KTADWIVDLGPEGGSGGGTILVAGTPEDVAEHPTSHTARFLKPLLQR 942
           K AD+++D GPEGG GGG I+  GTPE VA++  S T ++LK +L R
Sbjct: 906 KVADYLLDFGPEGGDGGGEIVAVGTPEQVADNKASWTGKYLKEVLDR 952