Pairwise Alignments

Query, 375 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 371 a.a., ABC transporter permease from Pectobacterium carotovorum WPP14

 Score =  221 bits (562), Expect = 3e-62
 Identities = 130/369 (35%), Positives = 198/369 (53%), Gaps = 4/369 (1%)

Query: 7   RELGALWQNPWQLALVSYLPILAMLALWWLFSAALPRQLPVAMVDLDNSSLSRELGRHIA 66
           RE  ALW++ W +AL  +LP++ ML  WW  S A+ R+LP+ ++DLDNS++SR+  R + 
Sbjct: 3   REWRALWRDRWGMALALWLPLITMLIAWWTLSGAIVRELPIGLIDLDNSTMSRQFARELH 62

Query: 67  ASPVIS-PISFASLPQAEDAMNRAEVYALVVVPHGFSRDLKTGAQPTVDVRYNGQFLLVG 125
           ASP  +    F+++ +   ++   E+YALVV+P  F RD++ G  PT+    NGQF+L+ 
Sbjct: 63  ASPSFNLNHQFSTVAEGATSLRGGEIYALVVIPRHFERDIRQGTSPTITAWNNGQFVLIA 122

Query: 126 KLLAANLQQAIADAMKPLAYSKQLAHGANPHQAHINIAPIATQTTALFNRNNNYVGFLVP 185
           K++ ++L          +A  + LA GA   +A     PI  Q TALFN+N+NY  FL+ 
Sbjct: 123 KVINSSLALVAGTFNGQIAVVRALAQGAAIPEAKGLAVPIGGQITALFNQNSNYAQFLLN 182

Query: 186 PVLIALWQLTAMLVFANALNRELEPSARCDSVGLLPRLGAKLLCYMPLLMLQGLFIHALL 245
            ++ ++W +   L   N L RE     R +       +GAK L +  +    G      L
Sbjct: 183 AIIPSIWSILLALYGLNTLAREDRRGTRWEPEN-RAAIGAKFLTHWLIGWAWGGVWSYAL 241

Query: 246 FGYLKLPVAASPLWLIPAMLALLLAVFLIVAVIFLLMQESARVVSFCTALFAPAFAFMGV 305
           +  L  P+  S L L  ++     A   +    + L+++ AR VS   AL AP  AFMG+
Sbjct: 242 YSLLNYPLNGSALLLFVSIGVTAGACVALGMAFYALIRDPARAVSIVGALMAPGLAFMGI 301

Query: 306 TFPVQDMPAAAQYWRLLMPSSHYIDSHIALVSYGVSGMELLGKSFTFMPFLLLLLPIALL 365
           TFP   M   A +WR L+P +HY D  IA+ SYG +G+  +  +   +    LLLP+ L 
Sbjct: 302 TFPAAAMETFATFWRQLLPVAHYGDIAIAITSYG-AGLIQIAPALAALALFWLLLPLTLW 360

Query: 366 A-RKGLKEA 373
             R G KEA
Sbjct: 361 CYRPGDKEA 369