Pairwise Alignments

Query, 375 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 380 a.a., ABC transporter permease from Serratia liquefaciens MT49

 Score = 74.3 bits (181), Expect = 5e-18
 Identities = 80/354 (22%), Positives = 156/354 (44%), Gaps = 25/354 (7%)

Query: 2   KTLLRRELGALWQNPWQLALVSYLPILAMLALWWLFSAALPRQLPVAMVDLDNSSLSREL 61
           +T +R  LG L + P  L L+  L +++M+     ++      LPV ++D D+S+ SR+L
Sbjct: 6   QTFVRVLLGML-ERPMWLMLILSLCVMSMV-----YANRTVWDLPVGVIDQDHSTASRQL 59

Query: 62  GRHIAASPVISPISFASLPQAEDAMNRAEVYALVVVPHGFSRDLKTGAQPTVDVRYNGQF 121
            R + A+  I+  ++ SL QA+  +   +++A++++P    + + +G    V V  +   
Sbjct: 60  IRQLDATSKIAIETYDSLEQAQRDLGWRKLFAVIIMPVDLEKKILSGQNIVVPVYGDA-- 117

Query: 122 LLVGKLLAANLQQAIADAMKPLAYSKQ----LAHGANPHQAHINIAPIATQTTALFNRNN 177
               +L    +QQ +  A + L         L  G +  QA + + PI  QT  +FN   
Sbjct: 118 --TNRLANGQIQQDVVAAYQQLLTQYNNGLLLRSGFSERQAQVILTPIVGQTLDVFNPGI 175

Query: 178 NYVGFLVPPVLIALWQLTAMLVFAN-ALNRELEPSARCDSVGLLPRLGAKLLCYMPLLML 236
           ++   + P +L+ L Q + ++     ++  +  P  +     L   LG  L   +P+ + 
Sbjct: 176 SFAAIIFPGLLVMLLQHSLLIACVRVSIAMKSMPGGKAP---LAAHLGG-LTALLPIWLF 231

Query: 237 QGLFIHAL---LFGYLKLPVAASPLWLIPAMLALLLAVFLIVAVIFLLMQESARVVSFCT 293
             + +  L   + GY +    A  L L    L  +L +  +V      ++     ++F T
Sbjct: 232 LSIVLFVLWPWVLGYRQTAGIAEILLLTFPFLLAVLGLGKLVTECLRSVEMIYLTLAFIT 291

Query: 294 ALFAPAFAFMGVTFPVQDMPAAAQYWRLLMPSSHYIDSHIALVSYGVSGMELLG 347
               P F   G  +P+Q MP   +     +PS+    +   +   G+S  E+ G
Sbjct: 292 ---TPIFYLSGTIWPLQAMPGWVRAISYSIPSTWATKAVAGVNQMGLSLNEVWG 342