Pairwise Alignments

Query, 375 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 368 a.a., putative multidrug ABC transporter permease YbhR from Escherichia coli ECRC62

 Score = 64.7 bits (156), Expect = 4e-15
 Identities = 79/343 (23%), Positives = 139/343 (40%), Gaps = 38/343 (11%)

Query: 3   TLLRRELGALWQNPWQLALVSYLPILAMLALWWLFSAALPRQLPVAMVDLDNSSLSRELG 62
           TL+R+EL +L + P Q   +  LP+L  + L+   +        +A+ D DN   S EL 
Sbjct: 7   TLIRKELQSLLREP-QTRAILILPVLIQVILFPFAATLEVTNATIAIYDEDNGEHSVELT 65

Query: 63  RHIAASPVISPISFASLPQA-EDAMNRAEVYALVVVPHGFSRDLKTGAQPTVDVRYNGQF 121
           +  A +   + +     PQ     ++  +   LV  P  FSR L T     + +  +G+ 
Sbjct: 66  QRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFPADFSRKLDTFQTAPLQLILDGRN 125

Query: 122 LLVGKLLAANLQQAIADAMKPLAYSKQLAHGA-NPHQAHINIAPIATQTTALFNRNNNYV 180
               ++ A  LQQ + +      Y ++L  G   P+ + + +          +N N +Y 
Sbjct: 126 SNSAQIAANYLQQIVKN------YQQELLEGKPKPNNSELVVRN-------WYNPNLDYK 172

Query: 181 GFLVPPVLIALWQLTAMLVFANALNRELEPSARCDSVGLLPRLGAKLLCYMPLLMLQGLF 240
            F+VP ++  +  +  M+V + ++ RE E        G L +L    L    + +  G  
Sbjct: 173 WFVVPSLIAMITTIGVMIVTSLSVAREREQ-------GTLDQLLVSPLTTWQIFI--GKA 223

Query: 241 IHALLFGYLKLPVA-ASPLWLIPAMLALLLAVFLIVAVIF--LLMQESARVVSFCTA--- 294
           + AL+    +  +  A  +W      A  LA+F    VI+   L+     + S C+    
Sbjct: 224 VPALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISSLCSTQQQ 283

Query: 295 -------LFAPAFAFMGVTFPVQDMPAAAQYWRLLMPSSHYID 330
                     PA    G   PV++MP   Q    + P  H+ D
Sbjct: 284 AFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTD 326