Pairwise Alignments

Query, 517 a.a., outer membrane efflux protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 507 a.a., TolC family protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  170 bits (430), Expect = 1e-46
 Identities = 134/475 (28%), Positives = 232/475 (48%), Gaps = 41/475 (8%)

Query: 70  AAHAQSFDAAWQQLQQVSDKLAASSAKVDRARAERDAGEDMNLPELSLNGSYTRLEKPLE 129
           A  A ++ AA Q+++  S    A+   +  A+A+ D    +N P ++L+    R  K  +
Sbjct: 40  ATVALTYAAAQQRVRSNSSLGRAAGYGMQAAKAQADVAAGLNRPTVALDAQLIRYRKTFD 99

Query: 130 MDLRDLNPMASLDPASLPPALGAALGSIPGELF-------------ITPFTEQDI----- 171
           + L D    A  +  +  P L A L  +PG++              I     QD+     
Sbjct: 100 LSLGDTLDRAQAELGAAIPGLIADLPGVPGDVLQSVGQRLEAALPEIFAALPQDVRLQVD 159

Query: 172 ---FRASLSAMWPIYTGGRISAAQGIHEAL--LAEEEQQRELTRRELFTTLVDRYYGVMV 226
              FR +++A+ PIYTGG I A +    A   LA+ +QQ  ++  ++   L   Y+G ++
Sbjct: 160 DTTFRPTVTALQPIYTGGAIPALRRAAAANVDLAQAKQQEAVSLEDV--NLARAYFGQVL 217

Query: 227 AAELVRTQDKLVASLEKHVDHARKLEAHGQIAKVERLNAEVALDNARVQASSSRRQYEMT 286
           AAE ++   +     + H+ +AR LE+ G ++  + L  EVA D A+ Q + +  +++  
Sbjct: 218 AAEALKIARETRDGFDLHLRNARLLESQGVLSHAQTLQVEVARDAAQRQVNRAELEHDN- 276

Query: 287 NIALKSLLKKAET-----PSSGLFIALSEPSLPQLAELTQKSHPALKLLDAKETQ--ANG 339
             A+ SL +  +T     P++ LF+   +P  P    L Q S    +L  A+  +  A  
Sbjct: 277 --AVASLARVVDTNGPVIPTTPLFVN-RDPVGPAGVFLDQASQTNARLAQAQAGRDLAEA 333

Query: 340 LIEVERGAYKPTVFLYGNYTLYEDDSLFAKMEPDWMLGVGFKMPLLSRDGRSGKVEAAHS 399
             ++     KP+V+ +G Y L  DD+L    EPDW +G+G +  L+S   R   + AA +
Sbjct: 334 GADLAASRMKPSVYAFGTYNLNSDDAL--PTEPDWAVGIGARYTLISTVDRRRMLGAARA 391

Query: 400 ALLQARHTKAQTREDLSLLLEQSFRQLRQAEEEYRALDSSRALAMENLRLRELAFNQGMS 459
               A   + Q R+D  LL+ +++ Q   A  ++ ++DSS   A ENLR++E+ F +G +
Sbjct: 392 QASAAAEVERQARDDARLLVTRAYNQAELARRQFLSMDSSLEAASENLRVQEVGFREGEA 451

Query: 460 TSIERVDAELKLTAVDTQQLGAKFRYVQAYARLMAISGQ---LDEFIGQAQRASA 511
           T+   VDA   L A   Q+  A + Y  + A L+A SG    L++++ +  R SA
Sbjct: 452 TAASVVDARNLLGAARLQRAAAAYEYDLSLAALLAASGSDLTLNDYLQREDRISA 506