Pairwise Alignments

Query, 517 a.a., outer membrane efflux protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 423 a.a., outer membrane efflux protein from Bacteroides ovatus ATCC 8483

 Score = 54.3 bits (129), Expect = 9e-12
 Identities = 62/313 (19%), Positives = 132/313 (42%), Gaps = 20/313 (6%)

Query: 181 PIYTGGRISAAQGIHEALLAEEEQQRELTRRELFTTLVDRYYGVMVAAELVRTQDKLVAS 240
           P+YTGG ++A   I +A     +   ELT  ++       Y+    +  +++  DK  + 
Sbjct: 102 PLYTGGALNAQHKIAKADERLNQLNEELTIDQIHYQSDAVYWNASASQAMLQAADKYQSI 161

Query: 241 LEKHVDHARKLEAHGQIAKVERLNAEVALDNARVQASSSRRQYEMTNIALKSLLKKAETP 300
           +++  D  +     G I++ + L     L  A +Q   +R+ Y +    L  L+   E P
Sbjct: 162 VKQQYDIIQDRFNDGMISRTDLLMISTRLKEAELQYIKARQNYTLALQKLNILM--GEDP 219

Query: 301 SSGLFIALSEPSLPQLAELTQKSHPALKLLDAKETQANGLI-EVERGA----YKPTVFLY 355
           ++ +    +  +     ++    +   +  D + T+ N +  + +R A    + P + +Y
Sbjct: 220 NNPVDSLYTIDTASAPVQILSLENVLQRRADYESTEVNIMKGQAQRKAALSQFNPQLNMY 279

Query: 356 ---GNYTLYEDDSLFAKMEPDWMLGVGFKMPLLSRDGR--SGKVEAAHSAL--LQARHTK 408
              G  T   +        P  ++G+   +P+     R  + + + A+  +  LQ  +  
Sbjct: 280 FSGGWATATPNLGYDVSFNP--IVGINLNIPIFRWGARFKTNRQQKAYIGIQKLQQSYVT 337

Query: 409 AQTREDLSLLLEQSFRQLRQAEEEYRALDSSRALAMENLRLRELAFNQGMSTSIERVDAE 468
               E+LS  L     +L + E + +    + +LA ENL L   ++N+G +  ++ + A+
Sbjct: 338 DNINEELSAAL----TKLTETEYQVKTAKETMSLANENLDLVSFSYNEGKANMVDVLSAQ 393

Query: 469 LKLTAVDTQQLGA 481
           L  T   T  + A
Sbjct: 394 LSWTQAHTNLINA 406



 Score = 26.2 bits (56), Expect = 0.002
 Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 12/109 (11%)

Query: 402 LQARHTKAQTREDLSLLLEQ-SFRQLR-QAEEEY----------RALDSSRALAMENLRL 449
           L A+H  A+  E L+ L E+ +  Q+  Q++  Y          +A D  +++  +   +
Sbjct: 109 LNAQHKIAKADERLNQLNEELTIDQIHYQSDAVYWNASASQAMLQAADKYQSIVKQQYDI 168

Query: 450 RELAFNQGMSTSIERVDAELKLTAVDTQQLGAKFRYVQAYARLMAISGQ 498
            +  FN GM +  + +    +L   + Q + A+  Y  A  +L  + G+
Sbjct: 169 IQDRFNDGMISRTDLLMISTRLKEAELQYIKARQNYTLALQKLNILMGE 217