Pairwise Alignments

Query, 502 a.a., ribonuclease G (RefSeq) from Shewanella amazonensis SB2B

Subject, 908 a.a., Ribonuclease E (EC 3.1.26.12) from Sphingobium sp. HT1-2

 Score =  218 bits (555), Expect = 7e-61
 Identities = 119/332 (35%), Positives = 195/332 (58%), Gaps = 9/332 (2%)

Query: 107 IAELVRQGQDIMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGSAHVG-VSQRIESEDER 165
           I +++++ Q ++VQVVK+  G KGA LTT ++L  RY V MP ++H G +S++I +  +R
Sbjct: 177 IQDVIKRRQVLLVQVVKEERGNKGAALTTYLSLAGRYCVLMPNTSHGGGISRKISNAADR 236

Query: 166 TRLK----EATLPFVDEDGGFIIRTAAEGAGAEELAQDAAFLRRVWAKVAERRKRKGS-S 220
            RLK    E  LP      G I+RTA       E+ +D  +L R+W ++ E+  R  +  
Sbjct: 237 KRLKSIIAEMALP---SSMGCIVRTAGLQRTKPEIKRDFDYLARLWDEIREKTLRAAAPE 293

Query: 221 LLYQDLALPVRIVRDFVGTDLDRIQVDSRSTFEELKHFAQEFMPEFEEKIELYSGSVPIF 280
           L++ D  L  R +RD    D++ + V+    ++  K F +  MP    +++ Y+ +V +F
Sbjct: 294 LIHNDSDLIKRAIRDIYNKDIEEVIVEGEHGYKAAKDFMKLLMPSHARRVKQYADAVSLF 353

Query: 281 DLYDVENEIQRALGRKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLEETIFNTNLEA 340
               VE+++       V+LKSGGYL+I+ TEA+ ++DIN+G       +E+T   TNLEA
Sbjct: 354 QRASVEDQLAAMYNPVVQLKSGGYLVINPTEALVSIDINSGRSTREHGIEQTAVATNLEA 413

Query: 341 TQAIARQLRLRNLGGIIIIDFIDMLSEDHRQRVLSSLTSALAHDRVKTNVSGFSGLGLVE 400
            + IARQLRLR++ G+++IDFIDM    + ++V  ++  AL  DR +  V   SG GL+E
Sbjct: 414 AREIARQLRLRDMAGLVVIDFIDMEMNSNIRKVEKAMKEALKDDRARIQVGRISGFGLME 473

Query: 401 MTRKRTRESLEHVLCGECPACKGSGYMKTVET 432
           M+R+R R  +      +CP C+G+G ++T  +
Sbjct: 474 MSRQRLRTGVLEASTRQCPHCEGTGLVRTASS 505



 Score = 52.8 bits (125), Expect = 5e-11
 Identities = 28/63 (44%), Positives = 39/63 (61%)

Query: 27 EARVALVEHGVLQEVHIERRMKRGLVGNIYKGKISRVLPGMQAAFVDIGLDKAAFLHASD 86
          E RVA+V+   ++E   E    + L GNIY  K++RV P +QAAFVD G ++  FL  S+
Sbjct: 14 ETRVAVVKGNRIEEFDFESAEHKQLKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLAFSE 73

Query: 87 IMP 89
          I P
Sbjct: 74 IHP 76