Pairwise Alignments

Query, 502 a.a., ribonuclease G (RefSeq) from Shewanella amazonensis SB2B

Subject, 1091 a.a., ribonuclease E from Pseudomonas putida KT2440

 Score =  293 bits (749), Expect = 3e-83
 Identities = 178/470 (37%), Positives = 269/470 (57%), Gaps = 10/470 (2%)

Query: 19  LLINVT-PNEARVALVEHGVLQEVHIERRMKRGLVGNIYKGKISRVLPGMQAAFVDIGLD 77
           +LIN T P E RVALV+   L ++ IE   +     NIYKGKI+R+ P ++AAFVD G +
Sbjct: 4   MLINATQPEELRVALVDGQRLYDLDIESGAREQKKANIYKGKITRIEPSLEAAFVDFGSE 63

Query: 78  KAAFLHASDIMPHTECVADVEKGNFVVRDIAELVRQGQDIMVQVVKDPLGTKGARLTTDI 137
           +  FL   +I    E      +G     +I E++ +GQ+++VQV K+  G KGA LTT I
Sbjct: 64  RHGFLPLKEIS--REYFKKAPEGRV---NIKEVLSEGQEVIVQVEKEERGNKGAALTTFI 118

Query: 138 TLPSRYLVFMPGSAHVG-VSQRIESEDERTRLKEATLPF-VDEDGGFIIRTAAEGAGAEE 195
           +L  RYLV MP +   G +S+RIE E ER  L+EA     V  D G I+RTA  G  +EE
Sbjct: 119 SLAGRYLVLMPNNPRAGGISRRIEGE-ERNELREALNGLTVPGDMGLIVRTAGLGRSSEE 177

Query: 196 LAQDAAFLRRVWAKVAERR-KRKGSSLLYQDLALPVRIVRDFVGTDLDRIQVDSRSTFEE 254
           +  D  +L ++W  + E    R    L+YQ+  + +R +RD++  D+  + +DS    EE
Sbjct: 178 MQWDLDYLLQLWTAIKEASLDRAAPFLIYQESNVIIRAIRDYLRQDIGEVLIDSIDAQEE 237

Query: 255 LKHFAQEFMPEFEEKIELYSGSVPIFDLYDVENEIQRALGRKVELKSGGYLIIDQTEAMT 314
              F ++ MP++  K++LY  SVP+F+ + +E++I+ A  R V+L SGG ++ID TEA+ 
Sbjct: 238 ALTFIRQVMPQYASKVKLYEDSVPLFNRFQIESQIETAFQRVVDLPSGGSIVIDPTEALV 297

Query: 315 TVDINTGAFVGHRNLEETIFNTNLEATQAIARQLRLRNLGGIIIIDFIDMLSEDHRQRVL 374
           ++DIN+       ++EET   TNLEA + IARQLRLR++GG+I+IDFIDM    +++ V 
Sbjct: 298 SIDINSARATKGSDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVE 357

Query: 375 SSLTSALAHDRVKTNVSGFSGLGLVEMTRKRTRESLEHVLCGECPACKGSGYMKTVETVT 434
             +   L  DR +  V   S  GL+EM+R+R R SL       CP C G+G ++ VE+++
Sbjct: 358 ERVRECLEADRARVQVGRISRFGLLEMSRQRLRPSLGESSGIVCPRCSGTGIIRDVESLS 417

Query: 435 YEIFREIIRLDKAYDADEFLVYCAPAVHACLSGDEHHHVAELEVYIGKRI 484
             I R I          E        V A L  ++ + + ++E+    RI
Sbjct: 418 LAILRLIEEEALKDRTAEVRAQVPIPVAAFLLNEKRNSITKIELRTRARI 467