Pairwise Alignments

Query, 419 a.a., type IV pilus biogenesis protein PilC (RefSeq) from Shewanella amazonensis SB2B

Subject, 407 a.a., general secretion pathway protein F (RefSeq) from Shewanella amazonensis SB2B

 Score =  223 bits (569), Expect = 6e-63
 Identities = 125/405 (30%), Positives = 223/405 (55%), Gaps = 10/405 (2%)

Query: 23  FEWKGLNRDGKKSSGELRGASVAEIKTLLKNQGINP--------KVVRKKSDGLFGASNK 74
           FE+K L+  GK+  G +   S    ++ L++  + P        K  + KS G F    +
Sbjct: 4   FEYKALDGKGKQQKGVIEADSARHARSQLRDMRLMPLEIEPVVEKETKAKSVG-FSPFKR 62

Query: 75  KINAMDIAMVTRQIATMLMAGVPLVTTIEILGKGHEKPKMRELLGTILNDIQAGIPLSDA 134
            I+  ++A++TRQIAT++ +G+P+   ++ +G+  EK ++  ++  + + +  G  L+D+
Sbjct: 63  GISVAELALITRQIATLVASGLPVEEALKAVGQQCEKDRLASMVMAVRSRVVEGYSLADS 122

Query: 135 LRPHRIYFDDLYVDLVAAGEHSGSLDTVFDRIATYREKAEALKSKIKKAMFYPAAVVVVA 194
           +      FDDLY  +VA+GE SG L+ V +R+A Y E+ + LKSK+ +AM YP  + +VA
Sbjct: 123 MAEFPHIFDDLYRSMVASGEKSGHLEVVLNRLADYTERRQQLKSKLTQAMIYPVMLTLVA 182

Query: 195 IAVTTLLLLFVVPQFEEIFTSFGAELPAFTQLIINISRFLQSSWYFFLTAIVGSIWLYVR 254
           I V  +LL  VVP+    F   G ELPA T+ ++  S F+Q      +  +V +  ++ R
Sbjct: 183 IGVVAVLLAAVVPKVVSQFEHLGQELPATTKALMASSAFVQDYGLLIMVLVVVAFVVFQR 242

Query: 255 AHRNSQAVRDRQDEFVLKIPVIGEILHKAAMARFARTLATTFAAGVPLIDGLESAAGASG 314
              N    + +  +F+L++PV+G +      ARFARTL+   A+ VPL+DG+  A     
Sbjct: 243 LLANDN-FKMKYHQFLLRLPVVGRVSRSINTARFARTLSILSASAVPLLDGMRIAGEVMQ 301

Query: 315 NAVYRKALLRIRTEVMAGMQMNVAMRTVNLFPDMLIQMVMIGEESGSLDNMLNKIANIYE 374
           N   R+A+      V  G  +  A+    LFP M++ M+  GE+SG L+NML + A+  +
Sbjct: 302 NLRVREAVEEATARVREGTSLGAALTNTKLFPPMMLYMIASGEKSGQLENMLERAADNQD 361

Query: 375 MQVDDAVDGLSSLIEPIMMVVIGTLVGGLIVGMYLPIFQMGNVVG 419
            + +  V+    + +P +++ +  +V  +++ +  PI +M N++G
Sbjct: 362 REFEANVNLALGVFQPALVISMAAVVLFIVLAILQPILEMNNLIG 406