Pairwise Alignments

Query, 419 a.a., type IV pilus biogenesis protein PilC (RefSeq) from Shewanella amazonensis SB2B

Subject, 407 a.a., general secretion pathway protein F from Escherichia coli ECOR38

 Score =  245 bits (626), Expect = 2e-69
 Identities = 140/404 (34%), Positives = 234/404 (57%), Gaps = 8/404 (1%)

Query: 23  FEWKGLNRDGKKSSGELRGASVAEIKTLLKNQGINPKVVRKKSDGLFGA-------SNKK 75
           F ++ L R+G+K+ G +   S    + LL+ + + P  +  + +   G        ++++
Sbjct: 4   FYYQALERNGRKTKGMIEADSARHARQLLRGKELIPVHIEARLNASTGGMLQRRRHAHRR 63

Query: 76  INAMDIAMVTRQIATMLMAGVPLVTTIEILGKGHEKPKMRELLGTILNDIQAGIPLSDAL 135
           + A D+A+ TRQ+AT++ A +PL T ++ + +  EK  ++ L   + + IQ G  LSD+L
Sbjct: 64  VAAADLALFTRQLATLVQAAMPLETCLQAVSEQSEKLHVKSLGMALRSRIQEGYTLSDSL 123

Query: 136 RPHRIYFDDLYVDLVAAGEHSGSLDTVFDRIATYREKAEALKSKIKKAMFYPAAVVVVAI 195
           R H   FD L+  +VAAGE SG LD V +R+A Y E+ + LKS++ +AM YP  ++VVA 
Sbjct: 124 REHPRVFDSLFCSMVAAGEKSGHLDVVLNRLADYTEQRQHLKSRLLQAMLYPLVLLVVAT 183

Query: 196 AVTTLLLLFVVPQFEEIFTSFGAELPAFTQLIINISRFLQSSWYFFLTAIVGSIWLYVRA 255
            V T+LL  VVP+  E F   G  LPA T+++I +S  LQ+S  ++L  ++G + L  R 
Sbjct: 184 GVVTILLTAVVPKIIEQFDHLGHALPASTRMLIAMSDTLQTSGVYWLAGLLGLLVLGQRL 243

Query: 256 HRNSQAVRDRQDEFVLKIPVIGEILHKAAMARFARTLATTFAAGVPLIDGLESAAGASGN 315
            +N  A+R R D+ +L++PV G +      ARF+RTL+   A+ VPL++G+++AA  S N
Sbjct: 244 LKN-PAMRLRWDKTLLRLPVTGRVARGLNTARFSRTLSILTASSVPLLEGIQTAAAVSAN 302

Query: 316 AVYRKALLRIRTEVMAGMQMNVAMRTVNLFPDMLIQMVMIGEESGSLDNMLNKIANIYEM 375
               + LL     V  G  +  A+  + LFP M++ M+  GE+SG L+ ML + A   E 
Sbjct: 303 RYVEQQLLLAADRVREGSSLRAALAELRLFPPMMLYMIASGEQSGELETMLEQAAVNQER 362

Query: 376 QVDDAVDGLSSLIEPIMMVVIGTLVGGLIVGMYLPIFQMGNVVG 419
           + D  V     L EP ++V++  +V  +++ +  P+ Q+ N+VG
Sbjct: 363 EFDTQVGLALGLFEPALVVMMAGVVLFIVIAILEPMLQLNNMVG 406