Pairwise Alignments

Query, 607 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella amazonensis SB2B

Subject, 608 a.a., ATP-dependent DNA helicase RecQ from Methylophilus sp. DMC18

 Score =  531 bits (1367), Expect = e-155
 Identities = 286/592 (48%), Positives = 386/592 (65%), Gaps = 11/592 (1%)

Query: 17  LQQVFGYRDFRPGQREVMTRVCQGEDCLVIMPTGGGKSLCYQVPALVLPGVTLVVSPLIS 76
           LQ VFGY  FR  Q+ ++  V  G+D LV+MPTGGGKSLCYQ+PAL   G+ +VVSPLI+
Sbjct: 10  LQDVFGYNQFRQQQQAIVEHVISGQDALVLMPTGGGKSLCYQIPALARDGLAIVVSPLIA 69

Query: 77  LMKDQVDSLIQSGVAAAYLNSSQPREQAIEVLRQLRFGELKLLYVSPERLLQGDFLSRLD 136
           LM+DQV++L Q GV AA+LNSS   E    + RQ+  GE+KLLYV+PERL+ G FLS LD
Sbjct: 70  LMQDQVEALQQLGVNAAFLNSSLSAEDNARITRQVVSGEIKLLYVAPERLMVGSFLSLLD 129

Query: 137 ELH----ISLFAVDEAHCISEWGHDFRPEYAALGQLKQRFPHVPVMALTATADEATRSSI 192
           E+     ++LFA+DEAHC+S+WGHDFRPEY  L  L  RFP VP +ALTATAD  TR+ I
Sbjct: 130 EVQQHVGLALFAIDEAHCVSQWGHDFRPEYRQLTILHNRFPEVPRIALTATADAPTRAEI 189

Query: 193 CERLGIQ-PFQHLASFDRPNIRYTVAEKLNAANQLRQFIQSQKGAN-GIVYCSSRRRVDE 250
             +L ++   Q ++SFDRPNIRY V  K NA  QL+ F++ +   + GI+YC SRR+V+E
Sbjct: 190 ISQLNLENARQFVSSFDRPNIRYHVGIKNNARQQLQAFLEREHPNDAGIIYCLSRRKVEE 249

Query: 251 VAERLRQQGFYAEGYHAGMTQDERASVQDRFLKDQIDVVVATVAFGMGINKSNVRFVVHY 310
            A  L ++G+ A  YHAG+    R   Q RFL+++  ++VAT+AFGMGI+K NVRFV H 
Sbjct: 250 TAAWLVEKGWSALPYHAGLPAQLRELHQRRFLREEGIIMVATIAFGMGIDKPNVRFVAHL 309

Query: 311 DIPKSIESYYQETGRAGRDGLDAEALLLFDPADIGRVRHLIEQQEPGPQ-QQVEFHKLYS 369
           D+PKS+E YYQETGRAGRDGL A A +++   D+  +R +++  E   + +++E  KL +
Sbjct: 310 DLPKSMEGYYQETGRAGRDGLQANAWMVYGMGDVVSMRQMLDSGEASEERKRLERLKLDA 369

Query: 370 MAAFAEAQTCRRQVLLHYFGEAANEPCGNCDICIDPPKRYNGTEDAQKVLSCIYRLNQRF 429
           +  + E+ TCR Q +L YFGE+    CG CD C+ P + +  T+ AQ  LSC+YR  QRF
Sbjct: 370 LLGYCESTTCRHQSILRYFGESHPGACGQCDNCLHPVETWQATQVAQMALSCVYRTGQRF 429

Query: 430 GVNHLIEVLRGSKAASVVDRGHDKLSTWGIGKEKSTEYWLSVTRQLIHLGLASQDITRGS 489
           GV HLI+VL G     V    HDK+ST+GIGK  +   W  V RQLI  GL   D+    
Sbjct: 430 GVGHLIDVLIGKVTPQVERFNHDKVSTFGIGKTLNQNQWSGVYRQLIAAGLLEADMAAYG 489

Query: 490 SVRLNSAARPVLKGEVALML---AEPRLSLSDVPRK-RTSSRTPQNYDRKLFARLKNLRR 545
            ++L  AARPVLKGE  + L   AEP   +S   R  R         D  L+  LK  R 
Sbjct: 490 GLKLTEAARPVLKGEQEVWLRRDAEPEKRMSKAERSARAKEAFEGANDDPLWQALKAKRL 549

Query: 546 TIAEEQDVPPYLVFNDATLAEMAWMLPKSEAELLAVNGVGERKLARFGGEFL 597
            +A EQ VPPY++F+D+TL E+    P++  E+  ++G+G+ KL ++G  FL
Sbjct: 550 ELAREQGVPPYVIFHDSTLLEIHNRKPQTLDEMGQISGIGQAKLQKYGDAFL 601