Pairwise Alignments

Query, 607 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella amazonensis SB2B

Subject, 620 a.a., DNA helicase RecQ from Magnetospirillum magneticum AMB-1

 Score =  544 bits (1401), Expect = e-159
 Identities = 291/603 (48%), Positives = 393/603 (65%), Gaps = 10/603 (1%)

Query: 15  HCLQQVFGYRDFRPGQREVMTRVCQGEDCLVIMPTGGGKSLCYQVPALVLPGVTLVVSPL 74
           H L+ VFG+  FR  Q EV+  V +G D LV+MPTG GKSLCYQVPAL   GV +VVSPL
Sbjct: 11  HILKTVFGFPAFRGQQEEVIRHVVEGGDALVLMPTGAGKSLCYQVPALCRDGVAIVVSPL 70

Query: 75  ISLMKDQVDSLIQSGVAAAYLNSSQPREQAIEVLRQLRFGELKLLYVSPERLLQGDFLSR 134
           I+LM++QV++L Q GV AA LNS++  ++A  + R+++ GEL L+YV+PERL+   FLS 
Sbjct: 71  IALMQNQVEALTQLGVRAAALNSARSPDEARVIERRMQAGELDLVYVAPERLVLPGFLSL 130

Query: 135 LDELHISLFAVDEAHCISEWGHDFRPEYAALGQLKQRFPHVPVMALTATADEATRSSICE 194
           L++  I+LFA+DEAHC+S+WGHDFRPEY  L  L +RFP VP +ALTATAD  TR  I E
Sbjct: 131 LEDCRIALFAIDEAHCVSQWGHDFRPEYLQLALLHERFPAVPRIALTATADGPTRRDIAE 190

Query: 195 RLGIQP-FQHLASFDRPNIRYTVAEKLNAANQLRQFIQSQKGA----NGIVYCSSRRRVD 249
           RL +Q   Q +A FDRPNIRY +A K NA  QL +FI+++ G     +GIVYC SR +V+
Sbjct: 191 RLNLQDGRQFVAGFDRPNIRYRIAAKNNAREQLARFIEAEHGGPGADSGIVYCLSRAKVE 250

Query: 250 EVAERLRQQGFYAEGYHAGMTQDERASVQDRFLKDQIDVVVATVAFGMGINKSNVRFVVH 309
           E A  L  +G+ A  YHAG+ Q  RA  Q+RFL++   V+VAT+AFGMGI+K +VRFV H
Sbjct: 251 ETAAWLAGKGYTALAYHAGLDQSVRAGNQERFLREDGIVMVATIAFGMGIDKPDVRFVAH 310

Query: 310 YDIPKSIESYYQETGRAGRDGLDAEALLLFDPADIGRVRHLI-EQQEPGPQQQVEFHKLY 368
            D+PKS+E+YYQETGRAGRDG  A+A + +   D+ ++   I   Q    Q+++E+ KL 
Sbjct: 311 LDLPKSLEAYYQETGRAGRDGQPADAWMAYGLEDVAKLGQFIASSQASDAQKRIEWQKLN 370

Query: 369 SMAAFAEAQTCRRQVLLHYFGEAANEPCGNCDICIDPPKRYNGTEDAQKVLSCIYRLNQR 428
           ++    E   CRRQVLL YFGE  + PCGNCD C++P   ++GTE A+K LSC+YR  + 
Sbjct: 371 ALLGLCETTRCRRQVLLEYFGETDHPPCGNCDTCLEPIASFDGTELARKALSCVYRTGES 430

Query: 429 FGVNHLIEVLRGSKAASVVDRGHDKLSTWGIGKEKSTEYWLSVTRQLIHLGLASQDITRG 488
           FG  H+I+VL G     V   GH++LST+GIG E   E W SV RQL+  GL S D    
Sbjct: 431 FGAGHVIDVLLGKDNDKVRRFGHERLSTFGIGTELPAEQWRSVLRQLVAAGLLSIDTEGH 490

Query: 489 SSVRLNSAARPVLKGEVALMLAEPRLSLSDVPR----KRTSSRTPQNYDRKLFARLKNLR 544
            + +L  A RPVL+ EV + L    L      +    K+T+    +  D  LF  L+  R
Sbjct: 491 GAFKLTEACRPVLRSEVRVDLRRDPLPARGKSKSSGGKKTAIALSEPGDEALFQHLRAER 550

Query: 545 RTIAEEQDVPPYLVFNDATLAEMAWMLPKSEAELLAVNGVGERKLARFGGEFLDEIAAYI 604
             +A+ Q VP Y++ +DATL E+A   P+   +L  + G+GE K  R+G   LD +AA+ 
Sbjct: 551 VALAKAQGVPSYVIMHDATLLEVARRRPRQPGDLADIPGLGEAKRERYGQILLDAVAAFE 610

Query: 605 SGD 607
           + D
Sbjct: 611 AQD 613