Pairwise Alignments

Query, 335 a.a., LacI family transcription regulator (RefSeq) from Shewanella amazonensis SB2B

Subject, 347 a.a., DNA-binding transcriptional regulator CytR from Pectobacterium carotovorum WPP14

 Score =  215 bits (548), Expect = 1e-60
 Identities = 113/305 (37%), Positives = 173/305 (56%), Gaps = 1/305 (0%)

Query: 4   IKKVSELAGVSTATVSRTLKSPERVSEQTRAKVMQAVKQAGYRPNWMATSVKTGKSNAIV 63
           +K V++ AGVSTATVSRTL +PE+VS  TR KV QAV   GY P+ +  ++K  +S  I+
Sbjct: 12  MKDVADEAGVSTATVSRTLMNPEKVSATTRRKVEQAVIAVGYSPHALNRNLKRNESRTIL 71

Query: 64  VLVPNLVNPFFMRIIEGIEQAAQEKGYCVLLGDTQGLQAREHEYASMVLTNRADGLIQLD 123
            +VP++ +P+F  I  GIE+ A E GY VL+GD      +E  +  +++T + DG++ L 
Sbjct: 72  TIVPDICDPYFSEIFRGIEETAAEHGYLVLIGDCAHQHQKEKTFVDLIITKQIDGMLLLG 131

Query: 124 HSFPFSDNDADLAATIPMVSVCERIEGDRKYPFIELDNHAAGRALAHHLIGFGHKHFGII 183
            + PF     +     PMV   E    D   P + +DN  A     H+L   GH+    I
Sbjct: 132 SNLPFDAGQEEQRNLPPMVMANE-FSPDLALPTVHIDNLTAAFEAVHYLYQAGHQRIACI 190

Query: 184 AGQRRSQIHHDRLTGIMSVLQGEGIDFKEDMLVGSSYSIETGIEGARELLSRNPRPSAIF 243
           AG     +   RL G +  L+  GI      +    ++ ETGI G   L+     PSA+F
Sbjct: 191 AGPEHMHLSQYRLQGYIQALRRNGILIDNQYIFRGDFTYETGINGLIALMQHPQPPSAVF 250

Query: 244 CFNDDIAIGAMFEIKSQGLKIPDDISVTGFDNVKVSAYMDPPLTTIDQPAYEMGRNAVEV 303
           C +D +A+G + + +  GL IP D+SV GFD+++ + Y  PPLT++ QP Y++GR A+ +
Sbjct: 251 CHSDLMALGVLAQARKMGLDIPRDLSVIGFDDIEQAQYSWPPLTSVAQPRYQIGREAMLL 310

Query: 304 LVQQI 308
           L++Q+
Sbjct: 311 LLEQL 315