Pairwise Alignments

Query, 699 a.a., bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (RefSeq) from Shewanella amazonensis SB2B

Subject, 738 a.a., Bifunctional (p)ppGpp synthase/hydrolase SpoT from Methylophilus sp. DMC18

 Score =  693 bits (1789), Expect = 0.0
 Identities = 350/691 (50%), Positives = 481/691 (69%), Gaps = 9/691 (1%)

Query: 14  YLDSGQVALLKQAYQVARDAHEGQMRTSGEPYITHPVAVAKILSDMRLDHETLMAALLHD 73
           YL+  +V L+ QAY+ A  AH GQ R +GEPYI+HPVAV  IL+ + LD  TL+AALLHD
Sbjct: 39  YLNEEEVQLVWQAYRYADQAHAGQTRKTGEPYISHPVAVTCILAKLHLDLPTLLAALLHD 98

Query: 74  TIEDTHVTKEDLAELFGDAVADLVEGVSKLDKLKFRDKKEAQAENFRKMMMAMTQDIRVI 133
            +EDT V    +AE FG  VADLV+G++KLDK++ +   +AQAENFRKM++AM+QD+RVI
Sbjct: 99  VVEDTEVDSAAIAERFGKQVADLVDGLTKLDKVELQTAMQAQAENFRKMLLAMSQDVRVI 158

Query: 134 LIKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHNIKTELEDLGFQAYYPM 193
           L+KLADR HNM+TL A+RP+K++RIARETL+IYAPIANRLG++ I  ELEDL  +  YP 
Sbjct: 159 LVKLADRLHNMQTLDAMRPEKQKRIARETLDIYAPIANRLGLNPIYHELEDLSLKYLYPN 218

Query: 194 RYRVLKEVVKAARGNRKELIQNIKTGIQARLEDAGIHAKVKGREKNLYSIYNKMRGKELQ 253
           RY V+ + ++ ARGNRKE+I  I   IQ +L   GI   V+GREK+L+SIY KM  K ++
Sbjct: 219 RYHVIDKAIRLARGNRKEVISKILEAIQNQLLQYGIEYDVQGREKHLFSIYKKMSEKSMK 278

Query: 254 FQEVMDIYAFRVIVDSIDTCYRVLGAMHGLYKPRPGRFKDYIAIPKANGYQSLHTSLFGP 313
             ++ DIY FRVIV     CY  LGA+H LYKP PGRFKDYIAIPKANGYQSLHT+LFGP
Sbjct: 279 LSQINDIYGFRVIVKDNAACYLALGALHALYKPIPGRFKDYIAIPKANGYQSLHTTLFGP 338

Query: 314 HGVPVEIQIRTDDMDQMADKGVAAHWVYKNGNENGSTTTQVRARKWMQSLLELQQSASSS 373
            G P+E+QIR+ +M  +AD GVAAHW+YK  + +  T  Q +  +W+Q L+E+Q  +  S
Sbjct: 339 FGTPIEVQIRSQEMHNIADAGVAAHWLYKTTDAH-LTKLQQQTHQWLQRLVEIQTESDDS 397

Query: 374 FEFVENVKTELFPDEIYVFTPEGRILELPVGATAVDFAYEVHTDVGNTCVGARVNRQAYP 433
            EF+EN K +LFPDE+YVFTP+G I+ LP G+TAVDFAY VH+DVGN+CV  ++N +  P
Sbjct: 398 HEFLENFKVDLFPDEVYVFTPKGNIMALPRGSTAVDFAYAVHSDVGNSCVAVKINNELAP 457

Query: 434 LSQPLISGQTVEIITAKGAKPNAAWLNFVVTGKARAKIRQVLKNLKQDEAIALGRRLLNH 493
           L   + +G  VEIITA  AKPN AWLN+VVTGKAR+ IR  LK +K +E+  LG R+LN 
Sbjct: 458 LRSEMRNGDHVEIITAPLAKPNPAWLNYVVTGKARSHIRHYLKTVKVEESAQLGERMLNV 517

Query: 494 ALGENKLD--SVAPELLDKVIQETKHKDLNSLLADIGLGNAMSIVIAQRLTGGAVPEKQS 551
           AL    ++   ++ +   KV+ +   K   ++L DIGLG   S+++A +L      E + 
Sbjct: 518 ALRAMHIEPGDISDKQWQKVMNDYGSKTRQAILTDIGLGKRNSLMVAHQLLAHPA-ETED 576

Query: 552 ET----HLMPIRGAEGMLVSFAKCCHPIPGDAVIAHVSPGKGLVVHMENCANIRGYQGEP 607
           +T      + IRG+EGM V FA CC PIPGD ++  ++  KGLV+H  +C  IR ++ +P
Sbjct: 577 KTGKVLDTITIRGSEGMAVQFAPCCRPIPGDPILGFINKDKGLVIHTHDCPAIRKFRLDP 636

Query: 608 DKYIPVHWDKVDGVEYQANLRVEIVNHQGALAKITSIIASEGSNIHNLSTEERDGRVYL- 666
           +K++ V WD      +  NLR+ +V+ +G LAKI + I++  +NI N+S E  DG  Y  
Sbjct: 637 EKWLDVEWDADPKKLFSVNLRITVVDERGMLAKIAATISNAEANIDNVSVETSDGSQYSN 696

Query: 667 INLRISVRDRIHLANVMRRIRVLPEVLRTSR 697
           +N  + V +R+HLA ++R +R + +++R +R
Sbjct: 697 VNFTLQVHNRVHLATLIRNLRKIQQIVRINR 727