Pairwise Alignments

Query, 365 a.a., tRNA (uracil-5-)-methyltransferase (RefSeq) from Shewanella amazonensis SB2B

Subject, 449 a.a., 23S rRNA (uracil-5-)-methyltransferase RumA from Pseudomonas sp. S08-1

 Score = 80.1 bits (196), Expect = 1e-19
 Identities = 62/200 (31%), Positives = 91/200 (45%), Gaps = 26/200 (13%)

Query: 172 DVDGKTLHYKQVE---------NSFTQPNAGVAVKMLEWALDATKQSSGD-LLELYCGNG 221
           D  G+TL Y+              F Q N  V   M+E ALD     +G+ +L+L+CG G
Sbjct: 256 DQPGQTLGYRLEPWNLELQYRPGDFVQVNGAVNQAMVEQALDWLAPQTGERVLDLFCGLG 315

Query: 222 NFSIALAPNFGKVLATELAKPSVEAAQYNIQVNKVSNLDIVRMSAEEFTEAMKGEKRFNR 281
           NF++ LA    +V+A E  +  VE A+ N   N + NL   +                N 
Sbjct: 316 NFALPLAQQVREVVAVEGVQAMVERARANAAANGLGNLHFFQADLS------------NP 363

Query: 282 LGDIDLQSYQCNTIFVDPPRAGLDDETVKLV--QGYENILYISCNPDTL-NDNLKVLSET 338
           L      +   + I +DPPR G   E VK +   G   ++Y+SCNP TL  D  +++ + 
Sbjct: 364 LAGAPWAAEGFDAILLDPPRDGA-FEVVKQIGELGARRLVYVSCNPATLARDTAELVKQG 422

Query: 339 HEVVRFALFDQFPYTHHTEA 358
             + R  + D FP T H EA
Sbjct: 423 FRLKRAGILDMFPQTAHVEA 442