Pairwise Alignments

Query, 365 a.a., tRNA (uracil-5-)-methyltransferase (RefSeq) from Shewanella amazonensis SB2B

Subject, 367 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Pectobacterium carotovorum WPP14

 Score =  469 bits (1208), Expect = e-137
 Identities = 226/366 (61%), Positives = 287/366 (78%), Gaps = 1/366 (0%)

Query: 1   MNAQAMDPQQYEQQLEQKCQALTEAFAHYNPPALEVFPSAPAHYRMRCEFRVWHDGDDLY 60
           M  + +  +QY+ QL +K + L    A +N P   VF S  +HYRMR EFR+WH+GD+LY
Sbjct: 1   MTPEILPIEQYDDQLAEKTERLRGMMAPFNAPEPVVFRSPVSHYRMRAEFRIWHEGDELY 60

Query: 61  YCMFDNVAKEKVRTDQFLPASELINRMMPALLDELRPNRALRHKLFQVDFLSTLSGEILV 120
           + MFD   K+++R D+F  ASELINR+MP LL  ++P+  LR KLFQ+D+LSTLSGE++V
Sbjct: 61  HIMFDQQTKQRIRVDRFPAASELINRLMPELLAAIQPDSVLRRKLFQIDYLSTLSGEVIV 120

Query: 121 SLLYHRQLDDQWLTEARALKARL-GEHFKVDIIGRARKQKFVLDRDFVVESLDVDGKTLH 179
           SLLYHR LD++W   ARAL+  L  + F++ +IGRA K K  LDRD+V E L V G+ + 
Sbjct: 121 SLLYHRALDEEWQEHARALRDSLTAQGFRLQLIGRATKTKICLDRDYVDECLPVAGRDMI 180

Query: 180 YKQVENSFTQPNAGVAVKMLEWALDATKQSSGDLLELYCGNGNFSIALAPNFGKVLATEL 239
           Y+QVENSFTQPNA + ++MLEWALDAT  S+GDLLELYCGNGNFS+ALA NF +VLATE+
Sbjct: 181 YRQVENSFTQPNAAINIQMLEWALDATAGSTGDLLELYCGNGNFSLALARNFERVLATEI 240

Query: 240 AKPSVEAAQYNIQVNKVSNLDIVRMSAEEFTEAMKGEKRFNRLGDIDLQSYQCNTIFVDP 299
           AKPSV AAQYNI  N++ N+ I+RM+AEEFT+AM+G ++FNRL  IDL SYQC TIFVDP
Sbjct: 241 AKPSVAAAQYNIAANQIENVQIIRMAAEEFTQAMQGVRQFNRLQGIDLTSYQCETIFVDP 300

Query: 300 PRAGLDDETVKLVQGYENILYISCNPDTLNDNLKVLSETHEVVRFALFDQFPYTHHTEAG 359
           PR+GLDDETVKLVQ Y  ILYISCNP+TL++NL+ LSETH++ R ALFDQFPYTHH E G
Sbjct: 301 PRSGLDDETVKLVQAYPRILYISCNPETLSNNLQTLSETHDIRRLALFDQFPYTHHMECG 360

Query: 360 VMLKRR 365
           V+L++R
Sbjct: 361 VLLEKR 366