Pairwise Alignments

Query, 365 a.a., tRNA (uracil-5-)-methyltransferase (RefSeq) from Shewanella amazonensis SB2B

Subject, 366 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Escherichia coli ECRC98

 Score =  446 bits (1147), Expect = e-130
 Identities = 218/363 (60%), Positives = 272/363 (74%), Gaps = 1/363 (0%)

Query: 1   MNAQAMDPQQYEQQLEQKCQALTEAFAHYNPPALEVFPSAPAHYRMRCEFRVWHDGDDLY 60
           M  + +  +QYE QL +K   L    A ++    EVF S  +HYRMR EFR+WHDGDDLY
Sbjct: 1   MTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHYRMRAEFRIWHDGDDLY 60

Query: 61  YCMFDNVAKEKVRTDQFLPASELINRMMPALLDELRPNRALRHKLFQVDFLSTLSGEILV 120
           + +FD   K ++R D F  ASELIN++M A++  +R N  LRHKLFQ+D+L+TLS + +V
Sbjct: 61  HIIFDQQTKSRIRVDSFPAASELINQLMTAMIAGVRNNPVLRHKLFQIDYLTTLSNQAVV 120

Query: 121 SLLYHRQLDDQWLTEARALKARL-GEHFKVDIIGRARKQKFVLDRDFVVESLDVDGKTLH 179
           SLLYH++LDD+W  EA AL+  L  ++  V +IGRA K K  LD+D++ E L V GK + 
Sbjct: 121 SLLYHKKLDDEWRQEAEALRDALRAQNLNVHLIGRATKTKIALDQDYIDERLPVAGKEMI 180

Query: 180 YKQVENSFTQPNAGVAVKMLEWALDATKQSSGDLLELYCGNGNFSIALAPNFGKVLATEL 239
           Y+QVENSFTQPNA + ++MLEWALD TK S GDLLELYCGNGNFS+ALA NF +VLATE+
Sbjct: 181 YRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARNFDRVLATEI 240

Query: 240 AKPSVEAAQYNIQVNKVSNLDIVRMSAEEFTEAMKGEKRFNRLGDIDLQSYQCNTIFVDP 299
           AKPSV AAQYNI  N + N+ I+RM+AEEFT+AM G + FNRL  IDL+SYQC TIFVDP
Sbjct: 241 AKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDP 300

Query: 300 PRAGLDDETVKLVQGYENILYISCNPDTLNDNLKVLSETHEVVRFALFDQFPYTHHTEAG 359
           PR+GLD ET K+VQ Y  ILYISCNP+TL  NL+ LS+TH+V R ALFDQFPYTHH E G
Sbjct: 301 PRSGLDSETEKMVQAYPRILYISCNPETLCKNLETLSQTHKVERLALFDQFPYTHHMECG 360

Query: 360 VML 362
           V+L
Sbjct: 361 VLL 363