Pairwise Alignments

Query, 703 a.a., type II and III secretion system protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 641 a.a., type II secretion system protein D from Enterobacter asburiae PDN3

 Score =  517 bits (1332), Expect = e-151
 Identities = 280/639 (43%), Positives = 408/639 (63%), Gaps = 46/639 (7%)

Query: 37  SFKNAEIQEFINTVGKRLNKTIIVDPTIRGKINVRSYDNLTEDQYFQFFLNVLQVYGYAV 96
           SFKN +++EFI+TVG+ LNKTI+VDP+++G ++VR+Y+ LTED+Y+QFFL+VL +YG +V
Sbjct: 29  SFKNTDVREFIDTVGRNLNKTILVDPSVQGTVSVRTYNVLTEDEYYQFFLSVLDLYGLSV 88

Query: 97  VEMENGVLKVIKDKDAKTSNIRVADDSAPGLGDELVTRIVPLYNSEAKQLAPLLRQLNDN 156
           + M+NG++KV++   A+ S   +AD   PG GDE++TR+V + N   ++LAPLLRQLND 
Sbjct: 89  IPMDNGMVKVVRSSVARMSGAPIADSKNPGKGDEVITRVVRMENVPVRELAPLLRQLNDA 148

Query: 157 AGGGNVVNYDPSNVLMLTGRAAVVNKLVEIVKRVDKQGDTEVLVVPLQHASASEMVRIID 216
           +G GNVV+++PSNVL+LTG+A+VVN+LV++V+RVD+ G     +VPL+ ASA E+  +++
Sbjct: 149 SGIGNVVHFEPSNVLLLTGKASVVNRLVDLVQRVDQSGVQRREIVPLRFASAKELSDMLN 208

Query: 217 TLYRASANQAQLPGQAPKVVADERINAVVISGDEKSRQRVVELVKRLDAEQASTGNTKVR 276
            L          P  A KVVAD+  N++VISG   +RQR   L+ +LD EQ + GNT+V 
Sbjct: 209 NLNNEEQKGQNAPQLATKVVADDETNSLVISGSPDARQRTRTLISQLDREQNNEGNTRVF 268

Query: 277 YLRYAKAEDLVEVLTGFAQKLEESKDNGAQQASGKRRSQINIMAHTDTNALVISAEPDQM 336
           YL+YA A  +V VLTG  ++L++ K  G +  +      +NI A   TN+LVI+A+P+ M
Sbjct: 269 YLKYANASKVVPVLTGIGEQLKD-KAGGGKSKAAPIAGDLNISADESTNSLVITAQPNVM 327

Query: 337 RTLESVINQLDIRRAQVLVEAIIVEVAEGDDVGFGVQWATESGGGTQFNNLGPTIGEIGA 396
            +LE VI++LDIRR QVLVEAII EV +G+ +  GVQW T   GG QF + G  I +I  
Sbjct: 328 NSLEKVIDKLDIRRPQVLVEAIIAEVQDGNGLDLGVQW-TSKHGGVQFGSTGLPISQIKK 386

Query: 397 GIWQARGEEASEVTTIDGNGNPIVSKNPEKRGDITLLAQALGKVNGMAWGVAMGDFGALI 456
                                                ++ +G   G+A G   GDFGAL+
Sbjct: 387 -------------------------------------SKVIGSYTGLATGFFNGDFGALM 409

Query: 457 QAVSSDTNSNVLATPSITTLDNQEAAFIVGDEVPVLTGAQNSSNGNSNPFQTVERKEVGV 516
            A+S++  +++L+TPS+ TLDN+EA+F VG +VPVL+G+Q +S    N F +VERK VG 
Sbjct: 410 TALSTNGKNDILSTPSVVTLDNKEASFNVGQDVPVLSGSQTTS--GDNVFNSVERKTVGT 467

Query: 517 KLKVTPQINEGNAVKLAIEQEVSGINGKTGVDV----TFATRRLTTTVMADSGQIVVLGG 572
           KLK+ PQIN+G+ + L IEQEVS ++  +  D     TF TR +   VM  SGQ VVLGG
Sbjct: 468 KLKIVPQINDGDMIHLKIEQEVSSVDNTSTADASLGPTFNTRTINNEVMVHSGQTVVLGG 527

Query: 573 LINEEVQESVQKVPILGDIPLLGHLFKSSSSGKKKKNLMVFIKPTIIRDGITMEGIAGRK 632
           L+    ++SV KVP+LGDIP++G LF+ +S    K+NLMVFI  T++RD       +  K
Sbjct: 528 LMENVTKQSVSKVPLLGDIPVVGQLFRYTSQDSAKRNLMVFIHTTVLRDDDNYGAASKEK 587

Query: 633 YNYFRALQLEQ-QERGVNLMPNTSVPVLEEWDQSQHLPP 670
           Y   +A Q ++ +E  + ++ N   P+L  +       P
Sbjct: 588 YEQIQARQQQRMEEHKLGIVENADSPMLPAYPSQSRAAP 626