Pairwise Alignments

Query, 350 a.a., glycosyl transferase family protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 352 a.a., lipopolysaccharide core heptosyltransferase RfaQ from Escherichia coli ECOR38

 Score = 84.3 bits (207), Expect = 4e-21
 Identities = 79/350 (22%), Positives = 154/350 (44%), Gaps = 19/350 (5%)

Query: 9   KSLCLLRLSAIGDVCHAVAMVQAIQRRYPDLAVTWVIGKVEYQLLKHLPGIEFVIFDKSQ 68
           + + L+++   GD+     ++ ++++ YPD  +  ++ +    +L   P I  +   K++
Sbjct: 6   RRILLIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSENPEINALYGIKNK 65

Query: 69  GFKA------YGQLCRALKGRHFDVLLHMQVALRATIASLMIPAKVRIGFDRARAKEGQW 122
             KA      +  L + L+   +D+++++       I   ++ A+V+I  D    +   W
Sbjct: 66  KAKASEKIANFFHLIKVLRANKYDLIVNLTDQWMVAILVRLLNARVKISQDYHHRQSAFW 125

Query: 123 LVTNERVEAMATPHVLEGFMGFARKLGVTELPPSWDMHIPAAD-EVFAKEL--VADGEKV 179
             +   +  +   +V+E  +     LG+  L     M  P A  +   +EL     G+  
Sbjct: 126 RNSFTHLVPLQGGNVVESNLSVLTPLGLESLVKQTTMSYPPASWKRMRRELDHAGVGQNY 185

Query: 180 LAICAAASKAERNWLPERYAAVADYAVSKGYRVLLCGGPAQLEKDLAAAIEANCSSK-LT 238
           + I   A +  + W   +++AV D   ++GY V+L  GP + +      I   C +  +T
Sbjct: 186 VVIQPTARQIFKCWDNAKFSAVIDALHARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVT 245

Query: 239 NLVGKTSLIQLLALLKRVSLVIAPDTGPAHMAVTQGTPVIGLYAHSNPGRTGPYFSRELT 298
            L GK +  +L AL+    L I  D+ PAH+A    TP+I L+     G T   F R  +
Sbjct: 246 ALAGKVTFPELGALIDHAQLFIGVDSAPAHIAAAVNTPLISLF-----GATDHIFWRPWS 300

Query: 299 VSVYDQVIAEQYPNQQIPW-GTRAKGDTLMEKIEVADVCRMFDRATDVAT 347
            ++  Q  A  Y  +++P    R + +  +  I  ADV    D+    +T
Sbjct: 301 NNMI-QFWAGDY--REMPTRDQRDRNEMYLSVIPAADVIAAVDKLLPSST 347