Pairwise Alignments

Query, 350 a.a., glycosyl transferase family protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 361 a.a., putative lipopolysaccharide heptosyltransferase III from Dickeya dadantii 3937

 Score = 81.3 bits (199), Expect = 4e-20
 Identities = 65/320 (20%), Positives = 144/320 (45%), Gaps = 22/320 (6%)

Query: 8   MKSLCLLRLSAIGDVCHAVAMVQAIQRRYPDLAVTWVIGKVEYQLLKHLPGIE--FVIFD 65
           ++ + + +    GDV     +   +++RYPD  +  ++     ++L   P I+  + +  
Sbjct: 9   LRRILITKFRHHGDVLLTSPLFSILRQRYPDAQIDALVFADTAEMLSLHPAIDQLYTVDK 68

Query: 66  KSQGFKAYGQLCR------ALKGRHFDVLLHMQVALRATIASLMIPAKVRIGF-DRARAK 118
           K +    +G L +       L+ + +D ++H+  ++R    + +    + + F + AR K
Sbjct: 69  KWKKLGTFGHLAKEWALLKTLRAQRYDAIIHLTESMRGLWIARLAGIPLGVTFRNNARDK 128

Query: 119 EGQWLVTNE-RVEAMATPHVLEGFMGFARKLGVTELPPSWDMHIPA---ADEVFAKELVA 174
              W  T + RV  ++  H +E  +   R LG+   P    + + A   AD    ++L A
Sbjct: 129 LSFWKKTFQYRVPRVSRRHTVESHLDTLRILGIQPEPEERRLQLIAGEDADRAVDQKLRA 188

Query: 175 D---GEKVLAICAAASKAERNWLPERYAAVADYAVSKGYRVLLCGGPAQLEKDLAAAIEA 231
               G+  + +   +    + W     A   +    +G+ ++L   PA+ E  + A I++
Sbjct: 189 QQWQGQPFIVVHPTSRWLFKCWKSSAMAEAINTLCERGHTIVLSASPAENEMAMIADIKS 248

Query: 232 NCSSKLTNLVGKTSLIQLLALLKRVSLVIAPDTGPAHMAVTQGTPVIGLYAHSNPGRTGP 291
             +  + +L G+ +L QL +L+    L++  D+ P H+A    TPV+ L+  S      P
Sbjct: 249 RLTHPVLDLAGQLTLKQLASLIGNAQLLLGVDSVPMHIASAMQTPVVALFGPSGETEWAP 308

Query: 292 YFSRELTVSVYDQVIAEQYP 311
           +      ++V   ++++++P
Sbjct: 309 W------MTVNRVIVSDRHP 322