Pairwise Alignments

Query, 303 a.a., D-alanyl-D-alanine endopeptidase (RefSeq) from Shewanella amazonensis SB2B

Subject, 308 a.a., periplasmic murein D-alanyl-D-alanine endopeptidase from Pseudomonas putida KT2440

 Score =  337 bits (863), Expect = 3e-97
 Identities = 173/302 (57%), Positives = 222/302 (73%), Gaps = 4/302 (1%)

Query: 1   MKSKLFKYISPLLMLG---LLSATSAQGAVKSDAKPTQ-ELASYSALLVDTKTNEVLYAS 56
           MK+ L      LL+ G   L S  +AQ   +    P++  LAS SALL+D  +N+ LY+S
Sbjct: 1   MKTSLSILSLLLLLTGTATLPSTAAAQPPAQVQRDPSKLHLASGSALLIDLNSNQELYSS 60

Query: 57  NPHQVVPIASISKLMTAMVTLDAKLPLGEKIAVEVKDNPEMKNVVSRIRLGSTLSRKEAM 116
           +  +VVPIAS++KLMTAMV LDAKLP+ E + + + +NPEMK V SR+RLGS L R+E +
Sbjct: 61  HADRVVPIASVTKLMTAMVVLDAKLPMDEMLTMTIANNPEMKGVYSRVRLGSQLDRRETL 120

Query: 117 LLTLMSSENRAATTLAHHYPGGYQAFVKAMNAKAKALGMTNTRFVEPTGLSVHNVSTAAD 176
           L+TLMSSENRAA +LA+ YPGGY AF+KAMNAKA++LGM +TR+VEPTGLS  NVSTA D
Sbjct: 121 LITLMSSENRAANSLANAYPGGYPAFIKAMNAKARSLGMAHTRYVEPTGLSTQNVSTARD 180

Query: 177 LVKLLKAAQDYPLLGQLSSTPSKSVTFGKPRYSLAFYNTNRLVNKDNWDIRLTKTGFTDA 236
           L KLL A++ YP+L +LS+T  K+V F KP Y+L F NT+ LVNK NWDI+LTKTGFT+ 
Sbjct: 181 LAKLLMASRKYPMLSELSTTREKTVAFRKPNYTLGFRNTDHLVNKSNWDIKLTKTGFTNE 240

Query: 237 AGHCLVMLTKMAKRDVAFVVLDSFGKQTHLGDAGRLKKWLETGKVSPLPDSAKTYKEQRK 296
           AGHCLV+LT+M  R VA V+LD+FGK TH  DA R+++WLETG   P P  A  YK  R+
Sbjct: 241 AGHCLVLLTRMDNRPVAMVILDAFGKYTHFADASRMRQWLETGSAKPAPAVAMQYKADRQ 300

Query: 297 RE 298
            +
Sbjct: 301 NK 302