Pairwise Alignments

Query, 541 a.a., inner membrane protein, 60 kDa (RefSeq) from Shewanella amazonensis SB2B

Subject, 560 a.a., membrane protein insertase from Pseudomonas simiae WCS417

 Score =  487 bits (1254), Expect = e-142
 Identities = 257/555 (46%), Positives = 356/555 (64%), Gaps = 22/555 (3%)

Query: 1   MESQRNLLLIGLLFVSFLLWQQWESD--KAPKPATEVT---AAAQIHDQAI------NSD 49
           M+ +R +L++ L  VS+++  +W  D  +A  P   V    AA  I D  +      ++D
Sbjct: 1   MDIKRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVATNQAAPAIPDTPLGNNASASAD 60

Query: 50  VPTAD----AGVPATVAATQNLILVTTDQLEIQINPVGGDIVHAAL-LTHKLEQNEEAPF 104
           VP+A+    A +   V   ++LI V TD L++ I+P GGDI    L L  + + + + PF
Sbjct: 61  VPSANGETSAPLETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPF 120

Query: 105 VLLEQKNNFSYIAQSGLIGRDGIDSAASGRAKFAAAADAYTLADGQDTLEVPLTLTTDAG 164
            L +     +Y+AQSGL G +G D+ A+GR  ++     Y LADGQ+ L V L  + D G
Sbjct: 121 QLFDNGGERTYLAQSGLTGTNGPDARATGRPVYSTEQKTYQLADGQNQLNVDLKFSLD-G 179

Query: 165 VTFTKVFVFKRGQFDVGVDYRVANNSAAPVQVQMYGQIKQTITASESSMMMP---TYRGA 221
           V + K F F RG +D+ V Y + N    P    ++ Q+K+  ++  SS       TY GA
Sbjct: 180 VNYIKRFSFTRGLYDLKVTYLIDNEGDKPWSGNLFAQLKRDASSDPSSSTATGTATYLGA 239

Query: 222 AFSTADVRYEKYSFDDMGKKDLEEPTLGGWVAMLQHYFVSAWVPAAADKNTLFTSVSAGG 281
           A  T+   Y+K S  D+ K  L+E   GGWVA LQHYFV+AW+P+  + N + T   + G
Sbjct: 240 ALWTSSEPYKKVSMKDIDKGSLKETVQGGWVAWLQHYFVTAWIPSKGEANLVQTRKDSQG 299

Query: 282 LANIGFKGSVHDVAPGATETISATFYVGPKDQAALSALSDTLNLVVDYGFLWWLAVPIHW 341
              IGF G    VAPGA    SAT Y GPK QA L  LS  L L VDYGFLW++A PI W
Sbjct: 300 NYIIGFTGPALTVAPGAKAETSATLYAGPKSQAVLKELSPGLELTVDYGFLWFIAQPIFW 359

Query: 342 ILMFFQSLVHNWGVAIILVTLTVRGLLYPLTKAQYVSMAKMRNLQPKLQDLKDRFGDDRQ 401
           +L    S+V NWG +II +T+ ++G+ +PL+ A Y SMA+MR + PKL  LK++ GDDRQ
Sbjct: 360 LLQHIHSIVGNWGFSIIFLTMLIKGIFFPLSAASYKSMARMRAVAPKLAALKEQHGDDRQ 419

Query: 402 KMGQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWIQDLSVQD 461
           KM QAMMELYKKEK+NP+GGCLPIL+QMP+F++LYWVLLESVE+R APFMLWI DLS++D
Sbjct: 420 KMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFMLWITDLSIKD 479

Query: 462 PYYVLPLLMGASMWAMQKMQPMAPNMDPMQQKMLQWMPMIFTVFFLWFPAGLVLYWLVGN 521
           P+++LP++MGA+M+  Q++ P  P  DPMQ K+++ MP+IFT FFLWFPAGLVLYW+V N
Sbjct: 480 PFFILPIIMGATMFIQQRLNPTPP--DPMQAKVMKMMPIIFTFFFLWFPAGLVLYWVVNN 537

Query: 522 LVAITQQKIIYASLE 536
           +++I+QQ  I   +E
Sbjct: 538 VLSISQQWYITRKIE 552