Pairwise Alignments

Query, 148 a.a., Predicted signal-transduction protein containing CBS domains (NCBI) from Rhodospirillum rubrum S1H

Subject, 384 a.a., nitrite transporter, HPP family (from data) from Pseudomonas putida KT2440

 Score = 44.7 bits (104), Expect = 2e-09
 Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 7/127 (5%)

Query: 10  VRDQTIFFVSAETTAREVARTLADNKIAAVVVMEDGVLKGIITERDVTARLVAKGG---- 65
           V  + + F + +TT  +  + LA + +  + V++ G L GI++  D+    + +G     
Sbjct: 244 VMSRDVQFATPDTTLEQAWKMLASHHLKTLPVLQHGKLVGIVSLSDLVGPAMQRGRFSWR 303

Query: 66  ---DPDSVMARAIMTPDPDTLAPEDTAEDALRMMRLRGYRHLPVVDGEGVVGMVSIRDLY 122
                 +V    +M+    +++ +   E  L ++  +G   LPV+DG+ +VG+++  DL 
Sbjct: 304 GLFGRQAVRMAQVMSRRVVSVSSQHPLERLLPLLCEQGLHCLPVLDGDKLVGVITQTDLI 363

Query: 123 AVVTDQL 129
           A +  QL
Sbjct: 364 AGLKRQL 370



 Score = 34.7 bits (78), Expect = 2e-06
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 31  LADNKIAAVVVMEDGVLKGIITERDVTARLVAKGGDPDSVMARAIMTPDPDTLAPEDTAE 90
           LA  ++   V +    L+ II   +  A   + GG    + A ++M+ D     P+ T E
Sbjct: 204 LALEELGEFVDVSRDELERIILATEQHALQRSLGG----ITAASVMSRDVQFATPDTTLE 259

Query: 91  DALRMMRLRGYRHLPVVDGEGVVGMVSIRDL 121
            A +M+     + LPV+    +VG+VS+ DL
Sbjct: 260 QAWKMLASHHLKTLPVLQHGKLVGIVSLSDL 290