Pairwise Alignments

Query, 376 a.a., Rod shape-determining protein RodA (NCBI) from Rhodospirillum rubrum S1H

Subject, 374 a.a., murein transpeptidase factor from Pseudomonas putida KT2440

 Score =  262 bits (669), Expect = 1e-74
 Identities = 153/355 (43%), Positives = 217/355 (61%), Gaps = 14/355 (3%)

Query: 22  RIH-DILFLLALAFLSLVGALALFSAAGGRADPWADSHLIRFGIGLVAALALACVNVRLI 80
           RIH D   L+ L  L+      L+SA+G   D         FGIGLV+   +A +  R +
Sbjct: 17  RIHIDGPLLIILLTLAAGSLFVLYSASGKNWDLLL-KQATSFGIGLVSMFVIAQLEPRFM 75

Query: 81  MHAAYAIYGFFLLALVGVAVFGHVGMGAQRWLNL-GVVAVQPSEFMKVGLIVALARYYHH 139
                  Y   +L LV V V GH  MGA RW+N+ GV+  QPSEFMK+ +   +A Y   
Sbjct: 76  ARWVPLAYLAGVLLLVVVDVMGHNAMGATRWINIPGVIRFQPSEFMKIIMPATIAWYLSK 135

Query: 140 LPNDRCTTLLAALPAAFLTLLPVGLVFL----QPNLGTSILLAATGGIIALLGGLPL-WT 194
                  TL   L    ++L+ +G+ F+    QP+LGT++L+ A+G  +  +GGL   W 
Sbjct: 136 ------RTLPPHLKHVAISLVLIGVPFMLIVRQPDLGTALLILASGAFVLFMGGLRWRWI 189

Query: 195 LVVAFTAAGVSLPVLWSHMHDYQKARVLTFLNPERDPLGAGYNIIQSKIALGSGGIWGKG 254
           L V   A  V++ + +  MHDYQK RVLTFL+PE DPLG G+NIIQSK A+GSGG++GKG
Sbjct: 190 LSVLAAAVPVAVAMWFFVMHDYQKQRVLTFLDPESDPLGTGWNIIQSKAAIGSGGVFGKG 249

Query: 255 LLNGSQSQLGFLPEKHTDFIFVVIAEELGMFGGMLILGACCAIVIYGYIVAARTKYVFGR 314
            L G+QS L FLPE HTDFI  V+ EE G+ G  L+L     ++  G ++ A+ + +FG+
Sbjct: 250 WLLGTQSHLDFLPESHTDFIIAVLGEEFGLVGICLLLIVYLLLIGRGLVITAQAQTLFGK 309

Query: 315 LCAVGVASSFFLYVFVNLAMVMGLIPVVGIPLPLVSYGGTVMIAVMVSAGLLLNI 369
           L A  +  +FF+YVFVN+ MV GL+PVVG+PLP +SYGGT ++ ++ + G+L++I
Sbjct: 310 LLAGSLTMTFFVYVFVNIGMVSGLLPVVGVPLPFISYGGTSLVTLLSAFGVLMSI 364