Pairwise Alignments

Query, 847 a.a., Protein of unknown function DUF214 (NCBI) from Rhodospirillum rubrum S1H

Subject, 832 a.a., putative ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  273 bits (697), Expect = 4e-77
 Identities = 243/845 (28%), Positives = 364/845 (43%), Gaps = 33/845 (3%)

Query: 11  VALRFALRELRAGLSGFRVLIACLAIGVAAIAAAGSVNRAIDEGLSANARQLLGGDLELR 70
           +ALR  LR++RA  S  RVL   L + VAA  A G     ++  +   A + LG DL L+
Sbjct: 9   LALRQLLRDVRA--SEVRVLFFALLVAVAASTAIGYFGARLNGAMQLRASEFLGADLVLQ 66

Query: 71  ----LMYRDLSAAEIATLERLGTLTRYTEMRAMVRPETNAEGRRLLVEMKGVEPGYPLYG 126
                  + L A +   L       R  E  ++V  +   +    L  +K  +  YPL G
Sbjct: 67  GSAPAREQQLDAGKALGLRH----ARVVEFTSVVGGDNGIQ----LSSVKAADGAYPLRG 118

Query: 127 AVELTDGQPLAGALAERDGLAGAV-AAPALADRLGIKVGDRLRVGDAVVELRGVIAREPD 185
            V      P A          G V   P L   LG+ +GD + VG   + +  V+  EPD
Sbjct: 119 QVRSAPA-PYAEETPGGGPAPGEVWVEPRLLAALGLAIGDSIDVGIKTLRMSRVLTYEPD 177

Query: 186 AIGGAFSFGPRLMVAAPTVAKTGLIQPGSLVEYHGLLRLEGGSDLARAKDILAAEHP-QA 244
                +S  PR+M+    +  TG+IQPGS V Y  L R   G   A A+   A E    A
Sbjct: 178 RANNFYSLTPRVMMNLADLEATGVIQPGSRVTYRDLWR---GDAEALAQYRQAVEKDLAA 234

Query: 245 GWRLRGPEEAGAGAQRFLDRLTLFLVLVGLTSLLVGGIGVANAVKAYLDGRIRTIAVLKC 304
             RLR   +        L +   +L +  L ++L+ G+ VA +   Y   R+   A+L+C
Sbjct: 235 NQRLRDTRDGNQQIGGALGKAERYLNMASLVAVLLAGVAVALSASRYAARRLDASALLRC 294

Query: 305 LGAPAGLIFRVYMIQIGLISLAGVGIGLLIGAALPPLAIALLADLLPVPAEAGVFAGPLL 364
           LG        +Y +Q+ ++ L     G L+G         LL  LLP    AG    P L
Sbjct: 295 LGLSRHQALGLYCLQLAMLGLVAALAGALLGWLAQLGLFRLLHGLLPSVVPAGGIV-PAL 353

Query: 365 LAAAFGLLTALVFSLGALSRARDIPATALFRGESAKGRGGRWRDRLMIAAGALTLAALAV 424
                GL+    F+L  ++    +P   + R +        W   L+  A  L L  +  
Sbjct: 354 AGIGTGLVALAGFALPPIAALGQVPPLRVLRRDLLPIPASSW---LVYGAALLALGLIMW 410

Query: 425 ATADDKPLAAWFVAGAGLALLLFRGAAALVGLLAKAAGRPSGLPALRLALTNLHRPGAAT 484
             + D  L  + + G GL   L  G   L+GL +            RL L  L R   A 
Sbjct: 411 RLSLDL-LLTFALLGGGLVAALLLGGLLLLGLRSLRQLLAGAPLTWRLGLGQLLRHPTAA 469

Query: 485 TSVVLSLGLGLSVLVAIALIQGNLDRQIREGIPAQAPTFFFIDIQPQQTATFEAAVHGAD 544
               L+ GL L  +  +AL++  L    +  +P  AP  F ++I P     F   +H  +
Sbjct: 470 AGQALAFGLILLAMALVALLRAELLDTWQAQLPKDAPNHFALNILPDDREPFIQHLHQVN 529

Query: 545 PGAKVVLADMIRGRIRAFNGVPVAEERIAPEA-RWAVRGDRGFSTAETLPEGSTLQAGAW 603
             A   L  +  GR+   N  PV +      A   AV+ D   + A  LPEG+ L AG+W
Sbjct: 530 -AASAPLYPVTPGRLVQINEKPVQQVVSKDSAGERAVQRDLSLTWAAELPEGNVLTAGSW 588

Query: 604 WPA---DYQGPPLFSLTSDLAEGMGLAPGDAVTVNILGRDLTGTLANTRKVDWGSLTMNF 660
           WPA   D   P + S+ ++LA  + L  GD +T +I G+     +++ R V W S   NF
Sbjct: 589 WPALPADNDIPGV-SVEAELASSLKLQMGDLLTFDIGGQQRQARVSSLRNVHWDSFQPNF 647

Query: 661 AFVVSPGAFAGAPRSYIATVRASEALASDVDKAVAAVLPNVSAIRVRDALDTVTAIMEGA 720
             +  PG   G P +Y+ +   +     DV  A++   P V+ ++V   LD + +I+   
Sbjct: 648 YMIFQPGTLQGLPTTYLTSFYLAPGHDLDV-VALSRAFPAVTILQVDALLDQLRSILAQV 706

Query: 721 GNAVRISALLTLIAGAVVLGGAFAANHGRRLREAVTLKVLGATRGQILRAYLTEYGILGL 780
             AV    L  L AG  VL     A    R+R+   L+ LGA R  +++A   E+G+LG 
Sbjct: 707 TLAVEYVLLFVLAAGLAVLFAGLQATLDERIRQGALLRALGAARPLLVKARRIEFGLLGA 766

Query: 781 ATGLIAALVGSVAAWGVLVFALRADWVLLPGVVATTAVGCVLATMAAGLAGTWRALGAKA 840
           A+GL+AA+   +  W +  +A    W   P ++     G +L    AG+ GT RAL A  
Sbjct: 767 ASGLLAAVGCELITWVLYRYAFDLQWSPHPWLLVLPLTGALLVG-GAGVLGTRRALNASP 825

Query: 841 APFLR 845
              LR
Sbjct: 826 LAVLR 830